Conservation of cofitness between GFF4333 and GFF4788 in Hydrogenophaga sp. GW460-11-11-14-LB1

23 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Hydrogenophaga sp. GW460-11-11-14-LB1 1.0 GFF4333 Arginine decarboxylase (EC 4.1.1.19); Ornithine decarboxylase (EC 4.1.1.17); Lysine decarboxylase (EC 4.1.1.18) 1.0 GFF4788 Methylmalonyl-CoA mutase (EC 5.4.99.2) 0.64 6
Acidovorax sp. GW101-3H11 0.88 Ac3H11_2914 Arginine decarboxylase (EC 4.1.1.19); Ornithine decarboxylase (EC 4.1.1.17); Lysine decarboxylase (EC 4.1.1.18) 0.87 Ac3H11_2278 Methylmalonyl-CoA mutase (EC 5.4.99.2) — —
Variovorax sp. SCN45 0.87 GFF232 Arginine decarboxylase (EC 4.1.1.19); Ornithine decarboxylase (EC 4.1.1.17); Lysine decarboxylase (EC 4.1.1.18) 0.88 GFF931 Methylmalonyl-CoA mutase (EC 5.4.99.2) / B12 binding domain of Methylmalonyl-CoA mutase (EC 5.4.99.2) low > 127
Variovorax sp. OAS795 0.86 ABID97_RS16535 arginine/lysine/ornithine decarboxylase 0.89 ABID97_RS13930 methylmalonyl-CoA mutase low > 91
Dechlorosoma suillum PS 0.74 Dsui_1245 arginine/lysine/ornithine decarboxylase 0.79 Dsui_0519 Methylmalonyl-CoA mutase (EC 5.4.99.2) (from data) — —
Paraburkholderia bryophila 376MFSha3.1 0.73 H281DRAFT_00160 ornithine decarboxylase 0.46 H281DRAFT_01038 methylmalonyl-CoA mutase — —
Rhizobium sp. OAE497 0.46 ABIE40_RS23760 Orn/Lys/Arg decarboxylase N-terminal domain-containing protein 0.63 ABIE40_RS21725 methylmalonyl-CoA mutase low > 107
Sinorhizobium meliloti 1021 0.46 SMa0682 decarboxylase (lysine, ornithine, arginine) 0.64 SM_b20757 methylmalonyl-CoA mutase low > 103
Escherichia coli ECRC101 0.32 MCAODC_03060 adiA arginine decarboxylase 0.60 MCAODC_09965 scpA methylmalonyl-CoA mutase — —
Escherichia coli ECOR38 0.32 HEPCGN_11185 adiA arginine decarboxylase 0.60 HEPCGN_18745 scpA methylmalonyl-CoA mutase low > 85
Escherichia coli ECRC99 0.32 KEDOAH_15615 adiA arginine decarboxylase 0.60 KEDOAH_08695 scpA methylmalonyl-CoA mutase — —
Escherichia coli ECRC101 0.32 OKFHMN_12550 adiA arginine decarboxylase 0.60 OKFHMN_19445 scpA methylmalonyl-CoA mutase — —
Escherichia coli BW25113 0.32 b4117 adiA biodegradative arginine decarboxylase (RefSeq) 0.60 b2917 yliK methylmalonyl-CoA mutase (NCBI) low > 76
Escherichia coli ECRC102 0.32 NIAGMN_10395 adiA arginine decarboxylase 0.60 NIAGMN_17210 scpA methylmalonyl-CoA mutase — —
Escherichia coli ECRC98 0.32 JDDGAC_16185 adiA arginine decarboxylase 0.60 JDDGAC_23085 scpA methylmalonyl-CoA mutase — —
Escherichia coli ECOR27 0.32 NOLOHH_04815 adiA arginine decarboxylase 0.60 NOLOHH_11350 scpA methylmalonyl-CoA mutase low > 57
Escherichia coli ECRC62 0.32 BNILDI_06675 adiA arginine decarboxylase 0.60 BNILDI_09885 scpA methylmalonyl-CoA mutase — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.32 OHPLBJKB_03927 Biodegradative arginine decarboxylase 0.60 OHPLBJKB_00799 Methylmalonyl-CoA mutase low > 73
Escherichia coli BL21 0.32 ECD_04002 lysine decarboxylase, acid-inducible 0.60 ECD_02748 methylmalonyl-CoA mutase low > 60
Klebsiella michiganensis M5al 0.32 BWI76_RS05300 lysine decarboxylase LdcC 0.61 BWI76_RS23935 methylmalonyl-CoA mutase low > 92
Rhodopseudomonas palustris CGA009 0.29 TX73_010575 Orn/Lys/Arg decarboxylase N-terminal domain-containing protein 0.62 TX73_009435 methylmalonyl-CoA mutase low > 86
Magnetospirillum magneticum AMB-1 0.29 AMB_RS05630 amino acid decarboxylase 0.27 AMB_RS01570 protein meaA low > 64
Azospirillum sp. SherDot2 0.29 MPMX19_05197 Inducible ornithine decarboxylase 0.66 MPMX19_05021 Methylmalonyl-CoA mutase low > 112
Azospirillum brasilense Sp245 0.29 AZOBR_RS27535 amino acid decarboxylase 0.68 AZOBR_RS21115 methylmalonyl-CoA mutase low > 97

Not shown: 39 genomes with orthologs for GFF4333 only; 18 genomes with orthologs for GFF4788 only