| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 1.0 | GFF3613 | | Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps | 1.0 | GFF4286 | | Shikimate kinase III (EC 2.7.1.71) | 0.77 | 11 |
| Enterobacter sp. TBS_079 | 0.92 | MPMX20_01973 | | Multidrug resistance protein MdtK | 0.61 | MPMX20_00978 | | Shikimate kinase 2 | 0.25 | 69 |
| Escherichia coli ECRC98 | 0.92 | JDDGAC_01950 | mdtK | multidrug efflux MATE transporter MdtK | 0.73 | JDDGAC_12255 | aroL | shikimate kinase AroL | low | > 86 |
| Escherichia coli ECRC102 | 0.92 | NIAGMN_00705 | mdtK | multidrug efflux MATE transporter MdtK | 0.73 | NIAGMN_06655 | aroL | shikimate kinase AroL | — | — |
| Escherichia coli ECRC101 | 0.92 | MCAODC_18050 | mdtK | multidrug efflux MATE transporter MdtK | 0.73 | MCAODC_27825 | aroL | shikimate kinase AroL | low | > 87 |
| Escherichia coli ECRC99 | 0.92 | KEDOAH_00750 | mdtK | multidrug efflux MATE transporter MdtK | 0.73 | KEDOAH_19365 | aroL | shikimate kinase AroL | — | — |
| Escherichia coli ECRC100 | 0.92 | OKFHMN_27360 | mdtK | multidrug efflux MATE transporter MdtK | 0.73 | OKFHMN_08600 | aroL | shikimate kinase AroL | low | > 80 |
| Escherichia coli Nissle 1917 | 0.92 | ECOLIN_RS09270 | | multidrug efflux MATE transporter MdtK | 0.73 | ECOLIN_RS02355 | | shikimate kinase AroL | — | — |
| Escherichia fergusonii Becca | 0.92 | EFB2_02329 | | Multidrug resistance protein MdtK | 0.73 | EFB2_03668 | | Shikimate kinase 2 | low | > 86 |
| Escherichia coli BW25113 | 0.92 | b1663 | mdtK | multidrug efflux protein NorM (NCBI) | 0.73 | b0388 | aroL | shikimate kinase II (NCBI) | low | > 76 |
| Escherichia coli ECRC62 | 0.92 | BNILDI_16670 | mdtK | multidrug efflux MATE transporter MdtK | 0.73 | BNILDI_22940 | aroL | shikimate kinase AroL | low | > 75 |
| Escherichia coli ECOR27 | 0.92 | NOLOHH_17880 | mdtK | multidrug efflux MATE transporter MdtK | 0.73 | NOLOHH_01525 | aroL | shikimate kinase AroL | low | > 75 |
| Escherichia coli ECOR38 | 0.92 | HEPCGN_05745 | mdtK | multidrug efflux MATE transporter MdtK | 0.73 | HEPCGN_07240 | aroL | shikimate kinase AroL | low | > 87 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.92 | OHPLBJKB_02061 | | Multidrug resistance protein MdtK | 0.73 | OHPLBJKB_03286 | | Shikimate kinase 2 | 0.57 | 32 |
| Escherichia coli BL21 | 0.92 | ECD_01634 | | multidrug efflux system transporter | 0.73 | ECD_00335 | | shikimate kinase II | low | > 61 |
| Klebsiella michiganensis M5al | 0.91 | BWI76_RS16535 | | MATE family efflux transporter | 0.58 | BWI76_RS06185 | | shikimate kinase II | low | > 92 |
| Enterobacter asburiae PDN3 | 0.90 | EX28DRAFT_1660 | | putative efflux protein, MATE family | 0.60 | EX28DRAFT_2583 | | shikimate kinase (EC 2.7.1.71) | low | > 76 |
| Serratia liquefaciens MT49 | 0.78 | IAI46_11210 | | MATE family efflux transporter | 0.53 | IAI46_04655 | | shikimate kinase AroL | 0.50 | 9 |
| Pantoea sp. MT58 | 0.77 | IAI47_10820 | | MATE family efflux transporter | 0.52 | IAI47_14930 | | shikimate kinase AroL | low | > 76 |
| Dickeya dianthicola 67-19 | 0.74 | HGI48_RS12700 | | MATE family efflux transporter | 0.56 | HGI48_RS05450 | | shikimate kinase AroL | low | > 71 |
| Dickeya dianthicola ME23 | 0.74 | DZA65_RS13155 | | MATE family efflux transporter | 0.55 | DZA65_RS05770 | | shikimate kinase AroL | low | > 75 |
| Erwinia tracheiphila SCR3 | 0.73 | LU632_RS11170 | | MATE family efflux transporter | 0.52 | LU632_RS18975 | aroL | shikimate kinase AroL | low | > 74 |
| Pectobacterium carotovorum WPP14 | 0.73 | HER17_RS09220 | | MATE family efflux transporter | 0.53 | HER17_RS16095 | | shikimate kinase AroL | low | > 75 |
| Rahnella sp. WP5 | 0.71 | EX31_RS13855 | | MATE family efflux transporter | 0.54 | EX31_RS21960 | | shikimate kinase AroL | low | > 89 |
| Pontibacter actiniarum KMM 6156, DSM 19842 | 0.26 | CA264_06370 | | MATE family efflux transporter | 0.21 | CA264_15995 | | shikimate kinase | — | — |
| Bacteroides thetaiotaomicron VPI-5482 | 0.20 | BT3804 | | putative transport protein, multidrug efflux protein (NCBI ptt file) | 0.20 | BT3393 | | shikimate kinase (NCBI ptt file) | — | — |
| Mucilaginibacter yixingensis YX-36 DSM 26809 | 0.20 | ABZR88_RS09785 | | MATE family efflux transporter | 0.21 | ABZR88_RS19855 | | shikimate kinase | — | — |
| Desulfovibrio vulgaris Hildenborough JW710 | 0.11 | DVU1217 | | MATE efflux family protein (TIGR) | 0.32 | DVU0892 | aroK-1 | shikimate kinase (TIGR) | low | > 55 |