Conservation of cofitness between GFF1743 and GFF3708 in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

22 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 1.0 GFF1743 Putative LysR-family transcriptional regulator YidZ 1.0 GFF3708 Cell filamentation protein fic 0.46 6
Escherichia coli ECRC99 0.82 KEDOAH_13200 yidZ HTH-type transcriptional regulator YidZ 0.87 KEDOAH_10925 fic putative adenosine monophosphate-protein transferase Fic — —
Escherichia coli ECRC102 0.82 NIAGMN_12705 yidZ HTH-type transcriptional regulator YidZ 0.87 NIAGMN_14985 fic putative adenosine monophosphate-protein transferase Fic — —
Escherichia coli ECRC100 0.82 OKFHMN_14950 yidZ HTH-type transcriptional regulator YidZ 0.87 OKFHMN_17215 fic putative adenosine monophosphate-protein transferase Fic low > 80
Escherichia coli ECRC98 0.82 JDDGAC_18570 yidZ HTH-type transcriptional regulator YidZ 0.87 JDDGAC_20845 fic putative adenosine monophosphate-protein transferase Fic low > 86
Escherichia coli ECRC62 0.82 BNILDI_04430 yidZ HTH-type transcriptional regulator YidZ 0.88 BNILDI_02505 fic putative adenosine monophosphate-protein transferase Fic low > 75
Escherichia coli ECRC101 0.82 MCAODC_05460 yidZ HTH-type transcriptional regulator YidZ 0.87 MCAODC_07745 fic putative adenosine monophosphate-protein transferase Fic low > 87
Escherichia coli HS(pFamp)R (ATCC 700891) 0.82 OHPLBJKB_04342 HTH-type transcriptional regulator YidZ 0.88 OHPLBJKB_00341 putative adenosine monophosphate-protein transferase fic low > 73
Escherichia coli BL21 0.82 ECD_03595 putative DNA-binding transcriptional regulator 0.87 ECD_03212 stationary phase-induced protein, putative toxin low > 61
Escherichia coli ECOR27 0.82 NOLOHH_07100 yidZ HTH-type transcriptional regulator YidZ 0.88 NOLOHH_09015 fic putative adenosine monophosphate-protein transferase Fic low > 75
Escherichia fergusonii Becca 0.82 EFB2_04921 HTH-type transcriptional regulator YidZ 0.86 EFB2_00461 putative protein adenylyltransferase Fic low > 86
Escherichia coli BW25113 0.82 b3711 yidZ predicted DNA-binding transcriptional regulator (NCBI) 0.87 b3361 fic stationary-phase protein, cell division (NCBI) low > 76
Escherichia coli Nissle 1917 0.82 ECOLIN_RS21370 HTH-type transcriptional regulator YidZ 0.87 ECOLIN_RS19250 putative adenosine monophosphate-protein transferase Fic low > 55
Escherichia coli ECOR38 0.82 HEPCGN_13655 yidZ HTH-type transcriptional regulator YidZ 0.87 HEPCGN_16045 fic putative adenosine monophosphate-protein transferase Fic low > 87
Enterobacter sp. TBS_079 0.73 MPMX20_04648 HTH-type transcriptional regulator YidZ 0.80 MPMX20_04264 putative protein adenylyltransferase Fic low > 85
Enterobacter asburiae PDN3 0.72 EX28DRAFT_3995 Transcriptional regulator 0.71 EX28DRAFT_4167 Protein involved in cell division low > 76
Klebsiella michiganensis M5al 0.71 BWI76_RS00095 DNA-binding transcriptional regulator 0.88 BWI76_RS26010 cell filamentation protein Fic low > 92
Shewanella oneidensis MR-1 0.65 SO4020 transcriptional regulator, LysR family (NCBI ptt file) 0.29 SO0913 fic cell filamentation protein Fic (NCBI ptt file) low > 76
Rahnella sp. WP5 0.19 EX31_RS00910 LysR family transcriptional regulator 0.59 EX31_RS04640 putative adenosine monophosphate-protein transferase Fic low > 89
Pseudomonas sp. RS175 0.16 PFR28_02125 Nodulation protein D 2 0.39 PFR28_01193 putative protein adenylyltransferase Fic low > 88
Pseudomonas fluorescens FW300-N2E2 0.16 Pf6N2E2_1236 Transcriptional regulator, LysR family 0.38 Pf6N2E2_2254 Cell filamentation protein fic low > 103
Pseudomonas fluorescens SBW25-INTG 0.15 PFLU_RS00660 LysR family transcriptional regulator 0.38 PFLU_RS01330 putative adenosine monophosphate-protein transferase Fic low > 109
Pseudomonas fluorescens SBW25 0.15 PFLU_RS00660 LysR family transcriptional regulator 0.38 PFLU_RS01330 putative adenosine monophosphate-protein transferase Fic low > 109

Not shown: 12 genomes with orthologs for GFF1743 only; 11 genomes with orthologs for GFF3708 only