Conservation of cofitness between GFF3250 and GFF3400 in Sphingobium sp. HT1-2

20 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Sphingobium sp. HT1-2 1.0 GFF3250 RND efflux system, inner membrane transporter 1.0 GFF3400 L-lactate dehydrogenase low > 95
Sphingomonas koreensis DSMZ 15582 0.62 Ga0059261_1877 Cation/multidrug efflux pump 0.65 Ga0059261_2629 L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases low > 68
Xanthobacter sp. DMC5 0.41 GFF2940 Multidrug resistance protein MdtC 0.76 GFF2176 L-lactate dehydrogenase — —
Brevundimonas sp. GW460-12-10-14-LB2 0.40 A4249_RS10400 efflux RND transporter permease subunit 0.77 A4249_RS07680 FMN-dependent L-lactate dehydrogenase LldD low > 48
Rhodopseudomonas palustris CGA009 0.39 TX73_024325 efflux RND transporter permease subunit 0.46 TX73_022385 alpha-hydroxy acid oxidase low > 86
Caulobacter crescentus NA1000 Δfur 0.38 CCNA_03301 cation/multidrug efflux pump AcrB 0.65 CCNA_01209 L-lactate dehydrogenase low > 67
Caulobacter crescentus NA1000 0.38 CCNA_03301 cation/multidrug efflux pump AcrB 0.65 CCNA_01209 L-lactate dehydrogenase low > 66
Pseudomonas sp. SVBP6 0.38 COO64_RS08840 efflux RND transporter permease subunit 0.80 COO64_RS15315 lldD FMN-dependent L-lactate dehydrogenase LldD low > 93
Sinorhizobium meliloti 1021 0.37 SMc01829 transport transmembrane protein 0.44 SM_b20850 L-lactate dehydrogenase (cytochrome) (EC 1.1.2.3) (from data) low > 103
Ralstonia solanacearum PSI07 0.37 RPSI07_RS02515 AcrB/AcrD/AcrF family protein 0.44 RPSI07_RS14000 alpha-hydroxy-acid oxidizing protein low > 81
Agrobacterium fabrum C58 0.37 Atu2393 Acr family transporter 0.46 Atu2318 L-lactate dehydrogenase low > 89
Rhizobium sp. OAE497 0.37 ABIE40_RS14575 efflux RND transporter permease subunit 0.44 ABIE40_RS13790 alpha-hydroxy acid oxidase low > 107
Bosea sp. OAE506 0.35 ABIE41_RS05705 efflux RND transporter permease subunit 0.44 ABIE41_RS12435 alpha-hydroxy acid oxidase low > 77
Variovorax sp. SCN45 0.35 GFF522 RND efflux system, inner membrane transporter 0.43 GFF5984 L-lactate dehydrogenase low > 127
Variovorax sp. OAS795 0.34 ABID97_RS17720 efflux RND transporter permease subunit 0.43 ABID97_RS08010 alpha-hydroxy acid oxidase low > 91
Methylophilus sp. DMC18 0.34 GFF2200 Multidrug resistance protein MdtC 0.26 GFF2539 4-hydroxymandelate oxidase low > 43
Acidovorax sp. GW101-3H11 0.34 Ac3H11_1213 Cobalt-zinc-cadmium resistance protein CzcA; Cation efflux system protein CusA 0.41 Ac3H11_1623 L-lactate dehydrogenase (cytochrome) (EC 1.1.2.3) (from data) low > 79
Hydrogenophaga sp. GW460-11-11-14-LB1 0.34 GFF4562 Cobalt-zinc-cadmium resistance protein CzcA; Cation efflux system protein CusA 0.44 GFF2105 L-lactate dehydrogenase (EC 1.1.2.3) low > 90
Dyella japonica UNC79MFTsu3.2 0.30 ABZR86_RS17725 efflux RND transporter permease subunit 0.45 ABZR86_RS01315 alpha-hydroxy acid oxidase low > 74
Pseudomonas syringae pv. syringae B728a ΔmexB 0.29 Psyr_2622 Acriflavin resistance protein 0.73 Psyr_0908 FMN-dependent alpha-hydroxy acid dehydrogenase low > 86
Pseudomonas syringae pv. syringae B728a 0.29 Psyr_2622 Acriflavin resistance protein 0.73 Psyr_0908 FMN-dependent alpha-hydroxy acid dehydrogenase low > 86

Not shown: 7 genomes with orthologs for GFF3250 only; 49 genomes with orthologs for GFF3400 only