Conservation of cofitness between GFF1683 and GFF3397 in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

24 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 1.0 GFF1683 Tyrosine-specific transport protein 1.0 GFF3397 Transcription-repair coupling factor 0.79 9
Escherichia coli ECRC99 0.84 KEDOAH_02070 tyrP tyrosine transporter TyrP 0.96 KEDOAH_24285 mfd transcription-repair coupling factor — —
Escherichia coli ECRC100 0.84 OKFHMN_26035 tyrP tyrosine transporter TyrP 0.96 OKFHMN_03470 mfd transcription-repair coupling factor 0.64 64
Escherichia coli ECRC101 0.84 MCAODC_19370 tyrP tyrosine transporter TyrP 0.96 MCAODC_22830 mfd transcription-repair coupling factor low > 87
Escherichia coli ECRC102 0.84 NIAGMN_02030 tyrP tyrosine transporter TyrP 0.96 NIAGMN_24360 mfd transcription-repair coupling factor low > 80
Escherichia coli ECRC98 0.84 JDDGAC_00610 tyrP tyrosine transporter TyrP 0.96 JDDGAC_07130 mfd transcription-repair coupling factor low > 87
Escherichia coli ECRC62 0.84 BNILDI_15265 tyrP tyrosine transporter TyrP 0.96 BNILDI_19160 mfd transcription-repair coupling factor low > 75
Escherichia fergusonii Becca 0.84 EFB2_02039 Tyrosine-specific transport protein 0.96 EFB2_02861 Transcription-repair-coupling factor low > 86
Escherichia coli BL21 0.84 ECD_01875 tyrosine transporter 0.96 ECD_01110 transcription-repair coupling factor low > 61
Escherichia coli ECOR38 0.84 HEPCGN_04455 tyrP tyrosine transporter TyrP 0.96 HEPCGN_24015 mfd transcription-repair coupling factor low > 88
Escherichia coli HS(pFamp)R (ATCC 700891) 0.84 OHPLBJKB_01822 Tyrosine-specific transport protein 0.96 OHPLBJKB_02552 Transcription-repair-coupling factor low > 74
Escherichia coli ECOR27 0.84 NOLOHH_16475 tyrP tyrosine transporter TyrP 0.96 NOLOHH_20995 mfd transcription-repair coupling factor low > 76
Escherichia coli BW25113 0.84 b1907 tyrP tyrosine transporter (NCBI) 0.96 b1114 mfd transcription-repair coupling factor (NCBI) 0.20 23
Klebsiella michiganensis M5al 0.77 BWI76_RS18295 tyrosine transporter TyrP 0.94 BWI76_RS11205 transcription-repair coupling factor low > 92
Enterobacter asburiae PDN3 0.76 EX28DRAFT_0645 aromatic amino acid transport protein 0.94 EX28DRAFT_1816 transcription-repair coupling factor (mfd) low > 76
Enterobacter sp. TBS_079 0.75 MPMX20_02818 Tyrosine-specific transport protein 0.93 MPMX20_01795 Transcription-repair-coupling factor low > 85
Klebsiella pneumoniae MKP103 0.73 KDGMDA_25560 tyrosine transporter TyrP 0.92 KDGMDA_18800 transcription-repair coupling factor low > 95
Serratia liquefaciens MT49 0.71 IAI46_17525 tyrosine transporter TyrP 0.83 IAI46_10320 transcription-repair coupling factor low > 87
Pectobacterium carotovorum WPP14 0.69 HER17_RS15520 tyrosine transporter TyrP 0.84 HER17_RS08775 transcription-repair coupling factor low > 75
Shewanella oneidensis MR-1 0.45 SO2065 tyrP tyrosine-specific transport protein (NCBI ptt file) 0.56 SO2255 mfd transcription-repair coupling factor (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.45 Shewana3_1846 aromatic amino acid transporter (RefSeq) 0.56 Shewana3_2289 transcription-repair coupling factor (RefSeq) low > 73
Vibrio cholerae E7946 ATCC 55056 0.43 CSW01_18035 tyrosine transporter TyrP 0.64 CSW01_09445 transcription-repair coupling factor low > 62
Shewanella loihica PV-4 0.33 Shew_3188 aromatic amino acid permease (RefSeq) 0.56 Shew_1630 transcription-repair coupling factor (RefSeq) low > 60
Shewanella amazonensis SB2B 0.30 Sama_2939 tyrosine-specific transport protein, putative (RefSeq) 0.55 Sama_1330 transcription-repair coupling factor (RefSeq) low > 62
Acinetobacter radioresistens SK82 0.08 MPMX26_02005 hypothetical protein 0.47 MPMX26_01319 Transcription-repair-coupling factor — —

Not shown: 1 genomes with orthologs for GFF1683 only; 81 genomes with orthologs for GFF3397 only