Conservation of cofitness between PGA1_78p00280 and PGA1_c30470 in Phaeobacter inhibens DSM 17395

25 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Phaeobacter inhibens DSM 17395 1.0 PGA1_78p00280 putative sodium/alanine symporter 1.0 PGA1_c30470 mandelate racemase / muconate lactonizing enzyme 0.20 11
Sinorhizobium meliloti 1021 0.61 SM_b20069 amino acid carrier protein 0.58 SMc00459 hypothetical protein low > 103
Pontibacter actiniarum KMM 6156, DSM 19842 0.36 CA264_18025 sodium/alanine symporter 0.23 CA264_08690 dipeptide epimerase low > 74
Bacteroides thetaiotaomicron VPI-5482 0.32 BT4476 amino acid carrier protein (NCBI ptt file) 0.26 BT1313 muconate cycloisomerase (NCBI ptt file) low > 81
Enterobacter asburiae PDN3 0.31 EX28DRAFT_1903 amino acid carrier protein 0.37 EX28DRAFT_0997 L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily low > 76
Serratia liquefaciens MT49 0.30 IAI46_03050 sodium:alanine symporter family protein 0.42 IAI46_13460 L-Ala-D/L-Glu epimerase low > 86
Bacteroides ovatus ATCC 8483 0.30 BACOVA_05285 amino acid carrier protein 0.26 BACOVA_00613 Tat pathway signal sequence domain protein low > 94
Pseudomonas putida KT2440 0.29 PP_0496 Sodium/alanine symporter 0.11 PP_3715 Muconate cycloisomerase 1 low > 96
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.28 GFF1082 Putative alanine/glycine transport protein 0.38 GFF2677 L-alanine-DL-glutamate epimerase low > 78
Escherichia coli ECRC101 0.27 MCAODC_01600 yaaJ Uncharacterized transporter YaaJ 0.41 MCAODC_15975 ycjG L-Ala-D/L-Glu epimerase — —
Escherichia coli ECRC101 0.27 OKFHMN_11085 yaaJ Uncharacterized transporter YaaJ 0.41 OKFHMN_02295 ycjG L-Ala-D/L-Glu epimerase — —
Escherichia coli ECRC102 0.27 NIAGMN_08935 yaaJ Uncharacterized transporter YaaJ 0.41 NIAGMN_26465 ycjG L-Ala-D/L-Glu epimerase — —
Escherichia coli ECRC99 0.27 KEDOAH_17070 yaaJ Uncharacterized transporter YaaJ 0.41 KEDOAH_26480 ycjG L-Ala-D/L-Glu epimerase — —
Escherichia coli ECRC98 0.27 JDDGAC_14680 yaaJ Uncharacterized transporter YaaJ 0.41 JDDGAC_04840 ycjG L-Ala-D/L-Glu epimerase — —
Escherichia coli BW25113 0.27 b0007 yaaJ predicted transporter (NCBI) 0.41 b1325 ycjG putative muconate cycloisomerase I (EC 5.5.-.-) (VIMSS) low > 76
Escherichia coli ECOR38 0.27 HEPCGN_09090 yaaJ Uncharacterized transporter YaaJ 0.42 HEPCGN_25895 ycjG L-Ala-D/L-Glu epimerase low > 85
Escherichia coli ECRC62 0.27 BNILDI_08190 yaaJ Uncharacterized transporter YaaJ 0.40 BNILDI_18140 ycjG L-Ala-D/L-Glu epimerase — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.27 OHPLBJKB_03653 Amino-acid carrier protein AlsT 0.41 OHPLBJKB_02357 L-Ala-D/L-Glu epimerase low > 73
Escherichia coli ECOR27 0.27 NOLOHH_03415 yaaJ Uncharacterized transporter YaaJ 0.41 NOLOHH_19990 ycjG L-Ala-D/L-Glu epimerase low > 57
Escherichia coli BL21 0.27 ECD_00007 putative transporter 0.41 ECD_01302 L-Ala-D/L-Glu epimerase low > 60
Escherichia coli Nissle 1917 0.27 ECOLIN_RS00040 sodium:alanine symporter family protein 0.40 ECOLIN_RS07955 L-Ala-D/L-Glu epimerase — —
Escherichia fergusonii Becca 0.26 EFB2_04036 Amino-acid carrier protein AlsT 0.41 EFB2_02602 L-Ala-D/L-Glu epimerase low > 86
Klebsiella michiganensis M5al 0.26 BWI76_RS04265 sodium:alanine symporter family protein 0.43 BWI76_RS12500 dipeptide epimerase low > 92
Enterobacter sp. TBS_079 0.25 MPMX20_00715 Amino-acid carrier protein AlsT 0.39 MPMX20_02451 L-Ala-D/L-Glu epimerase low > 85
Rahnella sp. WP5 0.25 EX31_RS03925 alanine:cation symporter family protein 0.42 EX31_RS06345 L-Ala-D/L-Glu epimerase low > 89
Paraburkholderia sabiae LMG 24235 0.20 QEN71_RS14800 amino acid carrier protein 0.12 QEN71_RS15720 muconate/chloromuconate family cycloisomerase low > 153

Not shown: 28 genomes with orthologs for PGA1_78p00280 only; 28 genomes with orthologs for PGA1_c30470 only