Conservation of cofitness between GFF4603 and GFF253 in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

22 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 1.0 GFF4603 Putrescine/proton symporter, putrescine/ornithine antiporter PotE 1.0 GFF253 Transcriptional activator MetR 0.40 5
Escherichia coli BL21 0.96 ECD_00648 putrescine/proton symporter: putrescine/ornithine antiporter 0.93 ECD_03707 methionine biosynthesis regulon transcriptional regulator low > 61
Escherichia fergusonii Becca 0.96 EFB2_03405 Putrescine transporter PotE 0.93 EFB2_04809 HTH-type transcriptional regulator MetR low > 86
Escherichia coli ECRC62 0.96 BNILDI_21480 potE putrescine-ornithine antiporter 0.93 BNILDI_05070 metR HTH-type transcriptional regulator MetR low > 75
Escherichia coli ECOR27 0.96 NOLOHH_23475 potE putrescine-ornithine antiporter 0.93 NOLOHH_06460 metR HTH-type transcriptional regulator MetR low > 75
Escherichia coli Nissle 1917 0.96 ECOLIN_RS03735 putrescine-ornithine antiporter 0.93 ECOLIN_RS30005 HTH-type transcriptional regulator MetR
Escherichia coli BW25113 0.96 b0692 potE putrescine/proton symporter: putrescine/ornithine antiporter (NCBI) 0.93 b3828 metR DNA-binding transcriptional activator, homocysteine-binding (NCBI) low > 76
Escherichia coli ECOR38 0.96 HEPCGN_01140 potE putrescine-ornithine antiporter 0.93 HEPCGN_13030 metR HTH-type transcriptional regulator MetR low > 87
Escherichia coli ECRC100 0.95 OKFHMN_07095 potE putrescine-ornithine antiporter 0.93 OKFHMN_14330 metR HTH-type transcriptional regulator MetR low > 80
Escherichia coli ECRC99 0.95 KEDOAH_20875 potE putrescine-ornithine antiporter 0.93 KEDOAH_13820 metR HTH-type transcriptional regulator MetR
Escherichia coli ECRC98 0.95 JDDGAC_10745 potE putrescine-ornithine antiporter 0.93 JDDGAC_17955 metR HTH-type transcriptional regulator MetR low > 86
Escherichia coli ECRC101 0.95 MCAODC_26310 potE putrescine-ornithine antiporter 0.93 MCAODC_04835 metR HTH-type transcriptional regulator MetR low > 87
Escherichia coli ECRC102 0.95 NIAGMN_05150 potE putrescine-ornithine antiporter 0.93 NIAGMN_12085 metR HTH-type transcriptional regulator MetR
Enterobacter asburiae PDN3 0.93 EX28DRAFT_2286 putrescine-ornithine antiporter 0.92 EX28DRAFT_4493 Transcriptional regulator low > 76
Enterobacter sp. TBS_079 0.92 MPMX20_01335 Putrescine transporter PotE 0.92 MPMX20_04452 HTH-type transcriptional regulator MetR low > 85
Serratia liquefaciens MT49 0.82 IAI46_02035 putrescine-ornithine antiporter 0.84 IAI46_01030 HTH-type transcriptional regulator MetR low > 86
Vibrio cholerae E7946 ATCC 55056 0.77 CSW01_19400 putrescine-ornithine antiporter 0.55 CSW01_08580 HTH-type transcriptional regulator MetR low > 62
Shewanella amazonensis SB2B 0.76 Sama_3335 potE putrescine transporter (RefSeq) 0.38 Sama_2628 transcriptional activator protein MetR (RefSeq) low > 62
Shewanella sp. ANA-3 0.76 Shewana3_3872 potE putrescine transporter (RefSeq) 0.39 Shewana3_3470 LysR family transcriptional regulator (RefSeq) low > 73
Shewanella oneidensis MR-1 0.75 SO0313 potE putrescine-ornithine antiporter (NCBI ptt file) 0.39 SO0817 metR transcriptional activator protein MetR (NCBI ptt file) low > 76
Pseudomonas fluorescens GW456-L13 0.66 PfGW456L13_3775 Putrescine/proton symporter, putrescine/ornithine antiporter PotE 0.42 PfGW456L13_4778 Transcriptional activator MetR low > 87
Pseudomonas sp. S08-1 0.53 OH686_07040 Putrescine/proton symporter, putrescine/ornithine antiporter PotE 0.42 OH686_20465 Transcriptional activator MetR low > 80
Pseudomonas fluorescens FW300-N1B4 0.52 Pf1N1B4_4994 Putrescine/proton symporter, putrescine/ornithine antiporter PotE 0.42 Pf1N1B4_784 Transcriptional activator MetR low > 87

Not shown: 5 genomes with orthologs for GFF4603 only; 44 genomes with orthologs for GFF253 only