Conservation of cofitness between GFF2251 and GFF2351 in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

26 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 1.0 GFF2251 Formate dehydrogenase O gamma subunit (EC 1.2.1.2) 1.0 GFF2351 tRNA (uracil(54)-C5)-methyltransferase (EC 2.1.1.35) 0.57 8
Escherichia coli ECOR27 0.97 NOLOHH_06085 fdoI formate dehydrogenase cytochrome b556 subunit 0.94 NOLOHH_05680 trmA tRNA (uridine(54)-C5)-methyltransferase TrmA low > 75
Escherichia coli ECRC100 0.97 OKFHMN_13965 fdoI formate dehydrogenase cytochrome b556 subunit 0.94 OKFHMN_13535 trmA tRNA (uridine(54)-C5)-methyltransferase TrmA low > 80
Escherichia coli ECRC102 0.97 NIAGMN_11720 fdoI formate dehydrogenase cytochrome b556 subunit 0.94 NIAGMN_11285 trmA tRNA (uridine(54)-C5)-methyltransferase TrmA — —
Escherichia coli BL21 0.97 ECD_03777 formate dehydrogenase-O, cytochrome b556 subunit 0.94 ECD_03850 tRNA m(5)U54 methyltransferase, SAM-dependent; tmRNA m(5)U341 methyltransferase low > 61
Escherichia coli Nissle 1917 0.97 ECOLIN_RS22440 formate dehydrogenase cytochrome b556 subunit 0.94 ECOLIN_RS22900 tRNA (uridine(54)-C5)-methyltransferase TrmA low > 55
Escherichia coli ECRC62 0.97 BNILDI_05440 fdoI formate dehydrogenase cytochrome b556 subunit 0.94 BNILDI_05845 trmA tRNA (uridine(54)-C5)-methyltransferase TrmA low > 75
Escherichia fergusonii Becca 0.97 EFB2_04724 Formate dehydrogenase, cytochrome b556(fdo) subunit 0.94 EFB2_04645 tRNA/tmRNA (uracil-C(5))-methyltransferase low > 86
Escherichia coli ECRC101 0.97 MCAODC_04465 fdoI formate dehydrogenase cytochrome b556 subunit 0.94 MCAODC_04035 trmA tRNA (uridine(54)-C5)-methyltransferase TrmA low > 87
Escherichia coli ECOR38 0.97 HEPCGN_12600 fdoI formate dehydrogenase cytochrome b556 subunit 0.94 HEPCGN_12190 trmA tRNA (uridine(54)-C5)-methyltransferase TrmA low > 87
Escherichia coli BW25113 0.97 b3892 fdoI formate dehydrogenase-O, cytochrome b556 subunit (NCBI) 0.94 b3965 trmA tRNA (uracil-5-)-methyltransferase (NCBI) low > 76
Escherichia coli ECRC99 0.97 KEDOAH_14190 fdoI formate dehydrogenase cytochrome b556 subunit 0.94 KEDOAH_14625 trmA tRNA (uridine(54)-C5)-methyltransferase TrmA — —
Escherichia coli ECRC98 0.97 JDDGAC_17590 fdoI formate dehydrogenase cytochrome b556 subunit 0.94 JDDGAC_17160 trmA tRNA (uridine(54)-C5)-methyltransferase TrmA low > 86
Escherichia coli HS(pFamp)R (ATCC 700891) 0.97 OHPLBJKB_04159 Formate dehydrogenase, cytochrome b556(fdo) subunit 0.94 OHPLBJKB_04085 tRNA/tmRNA (uracil-C(5))-methyltransferase low > 73
Enterobacter asburiae PDN3 0.95 EX28DRAFT_4375 formate dehydrogenase, gamma subunit 0.88 EX28DRAFT_4428 tRNA (uracil(54)-C(5))-methyltransferase low > 76
Enterobacter sp. TBS_079 0.95 MPMX20_04578 Formate dehydrogenase, cytochrome b556(fdo) subunit 0.90 MPMX20_04515 tRNA/tmRNA (uracil-C(5))-methyltransferase low > 85
Klebsiella michiganensis M5al 0.95 BWI76_RS00455 formate dehydrogenase cytochrome b556 subunit 0.91 BWI76_RS00885 tRNA (uridine(54)-C5)-methyltransferase TrmA — —
Serratia liquefaciens MT49 0.83 IAI46_00220 formate dehydrogenase cytochrome b556 subunit 0.80 IAI46_24455 tRNA (uridine(54)-C5)-methyltransferase TrmA low > 86
Dickeya dadantii 3937 0.78 DDA3937_RS14165 formate dehydrogenase cytochrome b556 subunit 0.80 DDA3937_RS00990 tRNA (uridine(54)-C5)-methyltransferase TrmA low > 74
Dickeya dianthicola ME23 0.77 DZA65_RS14820 formate dehydrogenase cytochrome b556 subunit 0.79 DZA65_RS21430 tRNA (uridine(54)-C5)-methyltransferase TrmA low > 75
Dickeya dianthicola 67-19 0.77 HGI48_RS14150 formate dehydrogenase cytochrome b556 subunit 0.79 HGI48_RS20385 tRNA (uridine(54)-C5)-methyltransferase TrmA low > 71
Rahnella sp. WP5 0.70 EX31_RS05765 formate dehydrogenase cytochrome b556 subunit 0.78 EX31_RS14140 tRNA (uridine(54)-C5)-methyltransferase TrmA low > 89
Dechlorosoma suillum PS 0.62 Dsui_3280 formate dehydrogenase, gamma subunit 0.44 Dsui_2239 tRNA (uracil-5-)-methyltransferase low > 51
Pseudomonas fluorescens GW456-L13 0.45 PfGW456L13_3093 Formate dehydrogenase N gamma subunit (EC 1.2.1.2) 0.48 PfGW456L13_1430 tRNA (Uracil54-C5-)-methyltransferase (EC 2.1.1.35) low > 87
Pseudomonas putida KT2440 0.43 PP_0491 formate dehydrogenase-O, gamma subunit 0.48 PP_4654 tRNA/tmRNA (uracil-C(5))-methyltransferase low > 96
Pseudomonas fluorescens FW300-N2E3 0.43 AO353_24975 formate dehydrogenase 0.48 AO353_13905 tRNA (uracil-5-)-methyltransferase low > 101
Pseudomonas fluorescens FW300-N1B4 0.40 Pf1N1B4_4949 Formate dehydrogenase N gamma subunit (EC 1.2.1.2) 0.48 Pf1N1B4_2754 tRNA (Uracil54-C5-)-methyltransferase (EC 2.1.1.35) low > 87

Not shown: 6 genomes with orthologs for GFF2251 only; 20 genomes with orthologs for GFF2351 only