Conservation of cofitness between GFF1593 and GFF209 in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

25 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 1.0 GFF1593 Multidrug resistance protein B 1.0 GFF209 Crotonobetaine carnitine-CoA ligase (EC 6.3.2.-) 0.53 1
Klebsiella michiganensis M5al 0.93 BWI76_RS22100 multidrug effux MFS transporter subunit EmrB 0.17 BWI76_RS23695 deoxyribonyl-CoA synthetase (from data) low > 92
Escherichia coli Nissle 1917 0.92 ECOLIN_RS14970 multidrug efflux MFS transporter permease subunit EmrB 0.84 ECOLIN_RS00205 crotonobetaine/carnitine-CoA ligase low > 55
Escherichia coli ECOR38 0.92 HEPCGN_19970 emrB multidrug efflux MFS transporter permease subunit EmrB 0.84 HEPCGN_08905 caiC crotonobetaine/carnitine-CoA ligase low > 87
Escherichia coli BW25113 0.92 b2686 emrB multidrug efflux system protein (NCBI) 0.84 b0037 caiC predicted crotonobetaine CoA ligase:carnitine CoA ligase (RefSeq) low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.92 OHPLBJKB_01047 Multidrug export protein EmrB 0.84 OHPLBJKB_03619 Crotonobetaine/carnitine--CoA ligase low > 73
Escherichia coli ECRC102 0.92 NIAGMN_18545 emrB multidrug efflux MFS transporter permease subunit EmrB 0.84 NIAGMN_08765 caiC crotonobetaine/carnitine-CoA ligase — —
Escherichia coli ECRC101 0.92 MCAODC_11300 emrB multidrug efflux MFS transporter permease subunit EmrB 0.84 MCAODC_01430 caiC crotonobetaine/carnitine-CoA ligase low > 87
Escherichia coli ECRC62 0.92 BNILDI_11175 emrB multidrug efflux MFS transporter permease subunit EmrB 0.84 BNILDI_08355 caiC crotonobetaine/carnitine-CoA ligase low > 75
Escherichia fergusonii Becca 0.92 EFB2_01242 Multidrug export protein EmrB 0.84 EFB2_04008 Crotonobetaine/carnitine--CoA ligase low > 86
Escherichia coli ECRC99 0.92 KEDOAH_07360 emrB multidrug efflux MFS transporter permease subunit EmrB 0.84 KEDOAH_17240 caiC crotonobetaine/carnitine-CoA ligase — —
Escherichia coli BL21 0.92 ECD_02541 multidrug efflux system protein 0.83 ECD_00041 putative crotonobetaine/carnitine-CoA ligase low > 61
Escherichia coli ECRC100 0.92 OKFHMN_20775 emrB multidrug efflux MFS transporter permease subunit EmrB 0.84 OKFHMN_10915 caiC crotonobetaine/carnitine-CoA ligase low > 80
Escherichia coli ECRC98 0.92 JDDGAC_24440 emrB multidrug efflux MFS transporter permease subunit EmrB 0.84 JDDGAC_14510 caiC crotonobetaine/carnitine-CoA ligase low > 86
Escherichia coli ECOR27 0.92 NOLOHH_12615 emrB multidrug efflux MFS transporter permease subunit EmrB 0.84 NOLOHH_03250 caiC crotonobetaine/carnitine-CoA ligase low > 75
Ralstonia sp. UNC404CL21Col 0.55 ABZR87_RS11225 DHA2 family efflux MFS transporter permease subunit 0.19 ABZR87_RS06225 AMP-binding protein low > 80
Hydrogenophaga sp. GW460-11-11-14-LB1 0.53 GFF3757 Inner membrane component of tripartite multidrug resistance system 0.23 GFF428 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) low > 90
Variovorax sp. SCN45 0.51 GFF4771 Multidrug efflux system EmrAB-OMF, inner-membrane proton/drug antiporter EmrB (MFS type) 0.21 GFF3985 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) low > 127
Castellaniella sp019104865 MT123 0.50 ABCV34_RS05950 DHA2 family efflux MFS transporter permease subunit 0.19 ABCV34_RS00605 benzoate-CoA ligase family protein low > 48
Variovorax sp. OAS795 0.50 ABID97_RS20390 DHA2 family efflux MFS transporter permease subunit 0.22 ABID97_RS08915 ATP-dependent acyl-CoA ligase low > 91
Pseudomonas fluorescens GW456-L13 0.49 PfGW456L13_2606 Inner membrane component of tripartite multidrug resistance system 0.18 PfGW456L13_3400 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) low > 87
Pseudomonas syringae pv. syringae B728a 0.48 Psyr_1731 Drug resistance transporter EmrB/QacA subfamily 0.15 Psyr_0990 AMP-dependent synthetase and ligase low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.48 Psyr_1731 Drug resistance transporter EmrB/QacA subfamily 0.15 Psyr_0990 AMP-dependent synthetase and ligase low > 86
Rhodopseudomonas palustris CGA009 0.41 TX73_019160 DHA2 family efflux MFS transporter permease subunit 0.20 TX73_025095 AMP-binding protein low > 86
Azospirillum sp. SherDot2 0.29 MPMX19_04034 Multidrug export protein EmrB 0.21 MPMX19_03911 Crotonobetaine/carnitine--CoA ligase low > 112
Shewanella loihica PV-4 0.23 Shew_3405 EmrB/QacA family drug resistance transporter (RefSeq) 0.52 Shew_2673 caiC putative crotonobetaine/carnitine-CoA ligase (RefSeq) low > 60

Not shown: 57 genomes with orthologs for GFF1593 only; 3 genomes with orthologs for GFF209 only