Conservation of cofitness between GFF500 and GFF1907 in Hydrogenophaga sp. GW460-11-11-14-LB1

22 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Hydrogenophaga sp. GW460-11-11-14-LB1 1.0 GFF500 Type III secretion inner membrane protein (YscS,homologous to flagellar export components) 1.0 GFF1907 membrane protein, putative 0.62 8
Desulfovibrio vulgaris Miyazaki F 0.42 DvMF_2414 type III secretion protein, HrpO family (RefSeq) 0.16 DvMF_3082 protein of unknown function UPF0118 (RefSeq) low > 51
Escherichia coli ECRC102 0.42 NIAGMN_13055 escS type III secretion system LEE export apparatus protein EscS 0.12 NIAGMN_00840 ydiK AI-2E family transporter YdiK — —
Escherichia coli ECRC99 0.42 KEDOAH_12850 escS type III secretion system LEE export apparatus protein EscS 0.12 KEDOAH_00885 ydiK AI-2E family transporter YdiK — —
Escherichia coli ECRC101 0.42 OKFHMN_15295 escS type III secretion system LEE export apparatus protein EscS 0.12 OKFHMN_27225 ydiK AI-2E family transporter YdiK — —
Escherichia coli ECRC98 0.42 JDDGAC_18920 escS type III secretion system LEE export apparatus protein EscS 0.12 JDDGAC_01800 ydiK AI-2E family transporter YdiK — —
Escherichia coli ECRC101 0.42 MCAODC_05805 escS type III secretion system LEE export apparatus protein EscS 0.12 MCAODC_18185 ydiK AI-2E family transporter YdiK — —
Erwinia tracheiphila SCR3 0.38 LU632_RS03140 sctS type III secretion system export apparatus subunit SctS 0.13 LU632_RS11035 ydiK AI-2E family transporter YdiK low > 74
Pseudomonas fluorescens SBW25 0.37 PFLU_RS03555 EscS/YscS/HrcS family type III secretion system export apparatus protein 0.50 PFLU_RS10475 AI-2E family transporter low > 109
Pseudomonas fluorescens SBW25-INTG 0.37 PFLU_RS03555 EscS/YscS/HrcS family type III secretion system export apparatus protein 0.50 PFLU_RS10475 AI-2E family transporter low > 109
Pseudomonas fluorescens FW300-N2E2 0.37 Pf6N2E2_4537 Type III secretion inner membrane protein (YscS,homologous to flagellar export components) 0.50 Pf6N2E2_46 membrane protein, putative low > 103
Pseudomonas simiae WCS417 0.36 PS417_03495 type III secretory protein EscS 0.50 PS417_10400 membrane protein low > 88
Pectobacterium carotovorum WPP14 0.35 HER17_RS09975 type III secretion system export apparatus subunit SctS 0.41 HER17_RS20960 AI-2E family transporter low > 75
Ralstonia sp. UNC404CL21Col 0.34 ABZR87_RS18125 flagellar biosynthetic protein FliQ 0.45 ABZR87_RS08310 AI-2E family transporter — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.33 GFF4755 Type III secretion inner membrane protein (YscS,homologous to flagellar export components) 0.10 GFF3553 Putative membrane protein low > 78
Escherichia coli HS(pFamp)R (ATCC 700891) 0.32 OHPLBJKB_00857 hypothetical protein 0.12 OHPLBJKB_02036 Putative transport protein YdiK low > 73
Pseudomonas syringae pv. syringae B728a 0.31 Psyr_1207 type III secretion protein HrcS 0.47 Psyr_3210 Protein of unknown function UPF0118 — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.31 Psyr_1207 type III secretion protein HrcS 0.47 Psyr_3210 Protein of unknown function UPF0118 low > 86
Pseudomonas fluorescens FW300-N2C3 0.31 AO356_02700 type III secretion system protein SpaQ 0.50 AO356_21305 hypothetical protein low > 104
Burkholderia phytofirmans PsJN 0.29 BPHYT_RS25890 type III secretion protein 0.15 BPHYT_RS06810 membrane protein — —
Dickeya dadantii 3937 0.28 DDA3937_RS11700 type III secretion system export apparatus subunit SctS 0.11 DDA3937_RS12800 AI-2E family transporter YdiK low > 74
Dickeya dianthicola ME23 0.28 DZA65_RS12245 type III secretion system export apparatus subunit SctS 0.12 DZA65_RS13330 AI-2E family transporter YdiK low > 75
Dickeya dianthicola 67-19 0.28 HGI48_RS11760 type III secretion system export apparatus subunit SctS 0.12 HGI48_RS12865 AI-2E family transporter YdiK — —

Not shown: 6 genomes with orthologs for GFF500 only; 41 genomes with orthologs for GFF1907 only