Conservation of cofitness between GFF4068 and GFF1868 in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

24 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 1.0 GFF4068 IcmF-related protein 1.0 GFF1868 Naphthoate synthase (EC 4.1.3.36) 0.57 16
Cupriavidus basilensis FW507-4G11 0.43 RR42_RS03585 type VI secretion protein VasK 0.43 RR42_RS23695 dihydroxynaphthoic acid synthetase low > 128
Erwinia tracheiphila SCR3 0.28 LU632_RS00740 tssM type VI secretion system membrane subunit TssM 0.89 LU632_RS08115 menB 1,4-dihydroxy-2-naphthoyl-CoA synthase low > 74
Variovorax sp. SCN45 0.25 GFF6352 T6SS component TssM (IcmF/VasK) 0.44 GFF4297 2-ketocyclohexanecarboxyl-CoA hydrolase low > 127
Enterobacter sp. TBS_079 0.21 MPMX20_02678 hypothetical protein 0.97 MPMX20_03198 1,4-dihydroxy-2-naphthoyl-CoA synthase low > 85
Enterobacter asburiae PDN3 0.21 EX28DRAFT_0790 type VI secretion protein IcmF 0.97 EX28DRAFT_0342 1,4-Dihydroxy-2-naphthoyl-CoA synthase (EC 4.1.3.36) low > 76
Paraburkholderia graminis OAS925 0.13 ABIE53_003925 type VI secretion system protein ImpL 0.20 ABIE53_001500 enoyl-CoA hydratase/carnithine racemase low > 113
Pseudomonas sp. S08-1 0.12 OH686_12780 T6SS component TssM (IcmF/VasK) 0.17 OH686_00845 Methylglutaconyl-CoA hydratase low > 80
Vibrio cholerae E7946 ATCC 55056 0.11 CSW01_14615 type VI secretion system membrane subunit TssM 0.85 CSW01_09850 1,4-dihydroxy-2-naphthoyl-CoA synthase low > 62
Acinetobacter radioresistens SK82 0.10 MPMX26_00969 hypothetical protein 0.43 MPMX26_01932 1,4-dihydroxy-2-naphthoyl-CoA synthase 0.62 6
Herbaspirillum seropedicae SmR1 0.09 HSERO_RS03785 type VI secretion protein VasK 0.21 HSERO_RS20665 2,3-dehydroadipyl-CoA hydratase low > 78
Dickeya dianthicola ME23 0.09 DZA65_RS08605 type VI secretion system membrane subunit TssM 0.92 DZA65_RS06305 1,4-dihydroxy-2-naphthoyl-CoA synthase low > 75
Dickeya dadantii 3937 0.09 DDA3937_RS07080 type VI secretion system membrane subunit TssM 0.92 DDA3937_RS05925 1,4-dihydroxy-2-naphthoyl-CoA synthase low > 74
Paraburkholderia bryophila 376MFSha3.1 0.09 H281DRAFT_05373 type VI secretion system protein ImpL 0.20 H281DRAFT_03491 short chain enoyl-CoA hydratase (EC 4.2.1.17)/Enoyl-CoA hydratase (EC 4.2.1.17)
Dickeya dianthicola 67-19 0.09 HGI48_RS08010 type VI secretion system membrane subunit TssM 0.92 HGI48_RS05970 1,4-dihydroxy-2-naphthoyl-CoA synthase low > 71
Marinobacter adhaerens HP15 0.09 HP15_3463 type VI secretion protein IcmF 0.47 HP15_4142 naphthoate synthase low > 73
Pectobacterium carotovorum WPP14 0.08 HER17_RS04905 type VI secretion system membrane subunit TssM 0.92 HER17_RS15545 1,4-dihydroxy-2-naphthoyl-CoA synthase low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.08 OHPLBJKB_03439 hypothetical protein 0.98 OHPLBJKB_01448 1,4-dihydroxy-2-naphthoyl-CoA synthase low > 73
Escherichia coli ECRC99 0.08 KEDOAH_18235 tssM type VI secretion system membrane subunit TssM 0.98 KEDOAH_05250 menB 1,4-dihydroxy-2-naphthoyl-CoA synthase
Escherichia coli ECRC98 0.08 JDDGAC_13515 tssM type VI secretion system membrane subunit TssM 0.98 JDDGAC_26910 menB 1,4-dihydroxy-2-naphthoyl-CoA synthase low > 86
Escherichia coli ECRC101 0.08 MCAODC_00435 tssM type VI secretion system membrane subunit TssM 0.98 MCAODC_13985 menB 1,4-dihydroxy-2-naphthoyl-CoA synthase low > 87
Escherichia coli ECRC100 0.08 OKFHMN_09920 tssM type VI secretion system membrane subunit TssM 0.98 OKFHMN_22945 menB 1,4-dihydroxy-2-naphthoyl-CoA synthase low > 80
Escherichia coli ECRC102 0.08 NIAGMN_07770 tssM type VI secretion system membrane subunit TssM 0.98 NIAGMN_20715 menB 1,4-dihydroxy-2-naphthoyl-CoA synthase
Escherichia coli ECOR27 0.07 NOLOHH_02275 tssM type VI secretion system membrane subunit TssM 0.98 NOLOHH_14570 menB 1,4-dihydroxy-2-naphthoyl-CoA synthase low > 75
Escherichia fergusonii Becca 0.07 EFB2_03823 hypothetical protein 0.98 EFB2_01593 1,4-dihydroxy-2-naphthoyl-CoA synthase low > 86

Not shown: 17 genomes with orthologs for GFF4068 only; 31 genomes with orthologs for GFF1868 only