Conservation of cofitness between GFF1321 and GFF1690 in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

25 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 1.0 GFF1321 Galactose operon repressor, GalR-LacI family of transcriptional regulators 1.0 GFF1690 RNA polymerase sigma factor for flagellar operon 0.63 13
Escherichia fergusonii Becca 0.89 EFB2_01046 HTH-type transcriptional regulator GalR 0.94 EFB2_02023 RNA polymerase sigma factor FliA low > 86
Escherichia coli ECOR38 0.89 HEPCGN_19560 galR HTH-type transcriptional regulator GalR 0.95 HEPCGN_04135 fliA RNA polymerase sigma factor FliA low > 87
Escherichia coli Nissle 1917 0.89 ECOLIN_RS15925 HTH-type transcriptional regulator GalR 0.94 ECOLIN_RS10975 RNA polymerase sigma factor FliA low > 55
Escherichia coli BW25113 0.89 b2837 galR DNA-binding transcriptional repressor (NCBI) 0.94 b1922 fliA flagellar biosynthesis; alternative sigma factor 28; regulation of flagellar operons (VIMSS) low > 76
Escherichia coli ECRC62 0.89 BNILDI_10315 galR HTH-type transcriptional regulator GalR 0.95 BNILDI_15190 fliA RNA polymerase sigma factor FliA low > 75
Escherichia coli ECOR27 0.89 NOLOHH_11835 galR HTH-type transcriptional regulator GalR 0.95 NOLOHH_16400 fliA RNA polymerase sigma factor FliA 0.60 47
Escherichia coli HS(pFamp)R (ATCC 700891) 0.89 OHPLBJKB_00892 HTH-type transcriptional regulator GalR 0.94 OHPLBJKB_01807 RNA polymerase sigma factor FliA low > 73
Escherichia coli ECRC100 0.89 OKFHMN_19950 galR HTH-type transcriptional regulator GalR 0.95 OKFHMN_25780 fliA RNA polymerase sigma factor FliA low > 80
Escherichia coli ECRC101 0.89 MCAODC_10475 galR HTH-type transcriptional regulator GalR 0.95 MCAODC_19610 fliA RNA polymerase sigma factor FliA low > 87
Escherichia coli ECRC99 0.89 KEDOAH_08180 galR HTH-type transcriptional regulator GalR 0.95 KEDOAH_02310 fliA RNA polymerase sigma factor FliA
Escherichia coli ECRC98 0.89 JDDGAC_23615 galR HTH-type transcriptional regulator GalR 0.95 JDDGAC_00370 fliA RNA polymerase sigma factor FliA low > 86
Escherichia coli ECRC102 0.89 NIAGMN_17720 galR HTH-type transcriptional regulator GalR 0.95 NIAGMN_02270 fliA RNA polymerase sigma factor FliA
Enterobacter sp. TBS_079 0.84 MPMX20_03699 HTH-type transcriptional regulator GalR 0.96 MPMX20_02847 RNA polymerase sigma factor FliA low > 85
Enterobacter asburiae PDN3 0.84 EX28DRAFT_2913 Transcriptional regulators 0.96 EX28DRAFT_0625 RNA polymerase sigma factor, FliA/WhiG family low > 76
Pantoea sp. MT58 0.79 IAI47_16915 HTH-type transcriptional regulator GalR 0.85 IAI47_08160 RNA polymerase sigma factor FliA low > 76
Erwinia tracheiphila SCR3 0.76 LU632_RS06045 galR HTH-type transcriptional regulator GalR 0.85 LU632_RS13785 RNA polymerase sigma factor FliA low > 74
Serratia liquefaciens MT49 0.75 IAI46_20495 HTH-type transcriptional regulator GalR 0.84 IAI46_15785 RNA polymerase sigma factor FliA low > 86
Rahnella sp. WP5 0.75 EX31_RS13240 HTH-type transcriptional regulator GalR 0.82 EX31_RS09450 RNA polymerase sigma factor FliA low > 89
Dickeya dadantii 3937 0.71 DDA3937_RS17375 HTH-type transcriptional regulator GalR 0.82 DDA3937_RS13300 RNA polymerase sigma factor FliA low > 74
Dickeya dianthicola ME23 0.71 DZA65_RS18505 HTH-type transcriptional regulator GalR 0.82 DZA65_RS13835 RNA polymerase sigma factor FliA low > 75
Dickeya dianthicola 67-19 0.71 HGI48_RS17415 HTH-type transcriptional regulator GalR 0.82 HGI48_RS13350 RNA polymerase sigma factor FliA low > 71
Pectobacterium carotovorum WPP14 0.70 HER17_RS06380 HTH-type transcriptional regulator GalR 0.80 HER17_RS08355 RNA polymerase sigma factor FliA low > 75
Vibrio cholerae E7946 ATCC 55056 0.53 CSW01_11840 DNA-binding transcriptional regulator GalS 0.42 CSW01_10335 RNA polymerase sigma factor FliA low > 62
Shewanella amazonensis SB2B 0.35 Sama_1400 periplasmic binding protein/LacI transcriptional regulator (RefSeq) 0.45 Sama_2280 fliA flagellar biosynthesis sigma factor (RefSeq) low > 62
Burkholderia phytofirmans PsJN 0.23 BPHYT_RS29170 LacI family transcriptional regulator 0.50 BPHYT_RS18925 RNA polymerase sigma70

Not shown: 3 genomes with orthologs for GFF1321 only; 44 genomes with orthologs for GFF1690 only