Conservation of cofitness between EX31_RS17905 and EX31_RS21805 in Rahnella sp. WP5

19 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Rahnella sp. WP5 1.0 EX31_RS17905 HTH-type transcriptional regulator PuuR 1.0 EX31_RS21805 anti-sigma-E factor RseA 0.31 7
Serratia liquefaciens MT49 0.81 IAI46_10550 HTH-type transcriptional regulator PuuR 0.70 IAI46_19580 anti-sigma-E factor RseA low > 86
Enterobacter asburiae PDN3 0.80 EX28DRAFT_1500 Predicted transcriptional regulators 0.64 EX28DRAFT_0073 Negative regulator of sigma E activity low > 76
Klebsiella michiganensis M5al 0.79 BWI76_RS10700 XRE family transcriptional regulator 0.65 BWI76_RS21350 anti-RNA polymerase sigma factor SigE low > 92
Escherichia coli ECRC98 0.79 JDDGAC_04980 puuR HTH-type transcriptional regulator PuuR 0.65 JDDGAC_25045 rseA anti-sigma-E factor RseA low > 86
Escherichia coli ECRC100 0.79 OKFHMN_02435 puuR HTH-type transcriptional regulator PuuR 0.65 OKFHMN_21380 rseA anti-sigma-E factor RseA — —
Escherichia coli ECRC99 0.79 KEDOAH_26340 puuR HTH-type transcriptional regulator PuuR 0.65 KEDOAH_06840 rseA anti-sigma-E factor RseA — —
Escherichia coli ECRC101 0.79 MCAODC_15835 puuR HTH-type transcriptional regulator PuuR 0.65 MCAODC_11910 rseA anti-sigma-E factor RseA low > 87
Escherichia coli ECRC102 0.79 NIAGMN_26605 puuR HTH-type transcriptional regulator PuuR 0.65 NIAGMN_19150 rseA anti-sigma-E factor RseA — —
Escherichia coli ECOR38 0.79 HEPCGN_25765 puuR HTH-type transcriptional regulator PuuR 0.60 HEPCGN_20525 rseA anti-sigma-E factor RseA low > 87
Escherichia coli ECRC62 0.79 BNILDI_18270 puuR HTH-type transcriptional regulator PuuR 0.62 BNILDI_11855 rseA anti-sigma-E factor RseA low > 75
Escherichia coli BL21 0.79 ECD_01276 repressor for the divergent puu operons, putrescine inducible 0.62 ECD_02466 anti-sigma factor — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.79 OHPLBJKB_02383 HTH-type transcriptional regulator PuuR 0.61 OHPLBJKB_01135 Anti-sigma-E factor RseA low > 73
Escherichia coli BW25113 0.79 b1299 puuR DNA-binding transcriptional repressor (NCBI) 0.62 b2572 rseA anti-sigma factor (NCBI) low > 76
Escherichia coli ECOR27 0.79 NOLOHH_20120 puuR HTH-type transcriptional regulator PuuR 0.62 NOLOHH_13055 rseA anti-sigma-E factor RseA low > 75
Pantoea sp. MT58 0.68 IAI47_07115 HTH-type transcriptional regulator PuuR 0.68 IAI47_04855 anti-sigma-E factor RseA low > 76
Shewanella sp. ANA-3 0.36 Shewana3_3100 XRE family transcriptional regulator (RefSeq) 0.25 Shewana3_3031 anti sigma-E protein, RseA (RefSeq) — —
Shewanella oneidensis MR-1 0.36 SO1265 transcriptional regulator, putative (NCBI ptt file) 0.25 SO1343 rseA sigma-E factor negative regulatory protein (NCBI ptt file) low > 76
Shewanella loihica PV-4 0.36 Shew_0970 XRE family transcriptional regulator (RefSeq) 0.27 Shew_1049 anti sigma-E protein, RseA (RefSeq) — —
Shewanella amazonensis SB2B 0.35 Sama_2646 XRE family transcriptional regulator (RefSeq) 0.23 Sama_0875 sigma-E factor negative regulatory protein (RefSeq) low > 62

Not shown: 24 genomes with orthologs for EX31_RS17905 only; 11 genomes with orthologs for EX31_RS21805 only