| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Enterobacter asburiae PDN3 | 1.0 | EX28DRAFT_4481 | | haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED/haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E | 1.0 | EX28DRAFT_1917 | | pyrimidine utilization protein D | 0.67 | 9 |
| Enterobacter sp. TBS_079 | 0.94 | MPMX20_04464 | | 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase YigB | 0.82 | MPMX20_01696 | | Putative aminoacrylate hydrolase RutD | low | > 85 |
| Escherichia coli ECRC100 | 0.84 | OKFHMN_14415 | yigB | 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase YigB | 0.77 | OKFHMN_04630 | rutD | pyrimidine utilization protein D | low | > 80 |
| Escherichia coli ECRC98 | 0.84 | JDDGAC_18040 | yigB | 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase YigB | 0.77 | JDDGAC_08240 | rutD | pyrimidine utilization protein D | low | > 86 |
| Escherichia coli ECRC101 | 0.84 | MCAODC_04920 | yigB | 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase YigB | 0.77 | MCAODC_24015 | rutD | pyrimidine utilization protein D | low | > 87 |
| Escherichia coli ECRC102 | 0.84 | NIAGMN_12170 | yigB | 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase YigB | 0.77 | NIAGMN_23705 | rutD | pyrimidine utilization protein D | — | — |
| Escherichia coli ECRC99 | 0.84 | KEDOAH_13735 | yigB | 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase YigB | 0.77 | KEDOAH_23115 | rutD | pyrimidine utilization protein D | — | — |
| Escherichia coli ECOR27 | 0.84 | NOLOHH_06545 | yigB | 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase YigB | 0.77 | NOLOHH_21530 | rutD | pyrimidine utilization protein D | low | > 75 |
| Escherichia coli ECRC62 | 0.84 | BNILDI_04990 | yigB | 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase YigB | 0.76 | BNILDI_19695 | rutD | pyrimidine utilization protein D | low | > 75 |
| Escherichia coli BW25113 | 0.84 | b3812 | yigB | predicted hydrolase (NCBI) | 0.76 | b1009 | rarA | predicted hydrolase (NCBI) | low | > 76 |
| Escherichia coli ECOR38 | 0.84 | HEPCGN_13120 | yigB | 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase YigB | 0.77 | HEPCGN_23510 | rutD | pyrimidine utilization protein D | low | > 87 |
| Escherichia coli BL21 | 0.84 | ECD_03688 | | 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase; pyrimidine phosphatase; riboflavin synthesis | 0.76 | ECD_01012 | | putative reactive intermediate detoxifying aminoacrylate hydrolase | low | > 61 |
| Escherichia fergusonii Becca | 0.84 | EFB2_04825 | | 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase YigB | 0.77 | EFB2_03071 | | Putative aminoacrylate hydrolase RutD | low | > 86 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.84 | OHPLBJKB_04238 | | 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase YigB | 0.77 | OHPLBJKB_02657 | | Putative aminoacrylate hydrolase RutD | low | > 73 |
| Escherichia coli Nissle 1917 | 0.83 | ECOLIN_RS21880 | | 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase YigB | 0.77 | ECOLIN_RS05265 | | pyrimidine utilization protein D | — | — |
| Klebsiella michiganensis M5al | 0.79 | BWI76_RS01215 | | flavin mononucleotide phosphatase | 0.64 | BWI76_RS10765 | | pyrimidine utilization protein D | — | — |
| Rahnella sp. WP5 | 0.64 | EX31_RS15170 | | 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase YigB | 0.40 | EX31_RS24075 | | pyrimidine utilization protein D | low | > 89 |
| Serratia liquefaciens MT49 | 0.62 | IAI46_00730 | | 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase YigB | 0.45 | IAI46_09035 | | pyrimidine utilization protein D | low | > 86 |
| Pantoea sp. MT58 | 0.60 | IAI47_18395 | | 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase YigB | 0.49 | IAI47_12525 | | pyrimidine utilization protein D | low | > 76 |
| Alteromonas macleodii MIT1002 | 0.25 | MIT1002_00156 | | Flavin mononucleotide phosphatase YigB | 0.37 | MIT1002_03465 | | Putative aminoacrylate hydrolase RutD | low | > 70 |
| Pseudomonas syringae pv. syringae B728a | 0.23 | Psyr_0186 | | HAD-superfamily hydrolase, subfamily IA, variant 3:HAD-superfamily hydrolase, subfamily IA, variant 1 | 0.40 | Psyr_0996 | | Alpha/beta hydrolase fold protein | low | > 86 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.23 | Psyr_0186 | | HAD-superfamily hydrolase, subfamily IA, variant 3:HAD-superfamily hydrolase, subfamily IA, variant 1 | 0.40 | Psyr_0996 | | Alpha/beta hydrolase fold protein | low | > 86 |
| Variovorax sp. OAS795 | 0.22 | ABID97_RS17655 | | HAD-IA family hydrolase | 0.11 | ABID97_RS23830 | | alpha/beta fold hydrolase | low | > 91 |
| Pseudomonas stutzeri RCH2 | 0.22 | Psest_3768 | | haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED/haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E | 0.13 | Psest_3069 | | 3-oxoadipate enol-lactonase | low | > 67 |
| Variovorax sp. SCN45 | 0.21 | GFF502 | | Hydrolase | 0.38 | GFF3716 | | Possible hydrolase or acyltransferase RutD in novel pyrimidine catabolism pathway | low | > 127 |
Not shown: 31 genomes with orthologs for EX28DRAFT_4481 only; 19 genomes with orthologs for EX28DRAFT_1917 only