Conservation of cofitness between ECD_03444 and ECD_03944 in Escherichia coli BL21

24 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BL21 1.0 ECD_03444 L-threonine dehydrogenase 1.0 ECD_03944 formate-dependent nitrite reductase, 4Fe4S subunit low > 61
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_00114 Alcohol dehydrogenase 2 1.00 OHPLBJKB_03968 putative ferredoxin-like protein YdhX low > 73
Escherichia coli ECRC62 1.00 BNILDI_03780 yiaY L-threonine dehydrogenase 1.00 BNILDI_06465 nrfC cytochrome c nitrite reductase Fe-S protein low > 75
Escherichia coli BW25113 1.00 b3589 yiaY predicted Fe-containing alcohol dehydrogenase (NCBI) 1.00 b4072 nrfC formate-dependent nitrite reductase, 4Fe4S subunit (NCBI) low > 76
Escherichia coli ECOR27 1.00 NOLOHH_07750 yiaY L-threonine dehydrogenase 1.00 NOLOHH_05060 nrfC cytochrome c nitrite reductase Fe-S protein low > 75
Escherichia fergusonii Becca 1.00 EFB2_00220 Alcohol dehydrogenase 2 0.99 EFB2_04517 putative ferredoxin-like protein YdhX low > 86
Escherichia coli ECRC98 0.99 JDDGAC_19485 yiaY L-threonine dehydrogenase 1.00 JDDGAC_16445 nrfC cytochrome c nitrite reductase Fe-S protein low > 86
Escherichia coli ECRC101 0.99 MCAODC_06370 yiaY L-threonine dehydrogenase 1.00 MCAODC_03320 nrfC cytochrome c nitrite reductase Fe-S protein low > 87
Escherichia coli ECRC102 0.99 NIAGMN_13615 yiaY L-threonine dehydrogenase 1.00 NIAGMN_10655 nrfC cytochrome c nitrite reductase Fe-S protein — —
Escherichia coli ECRC99 0.99 KEDOAH_12295 yiaY L-threonine dehydrogenase 1.00 KEDOAH_15340 nrfC cytochrome c nitrite reductase Fe-S protein — —
Escherichia coli ECOR38 0.99 HEPCGN_14690 yiaY L-threonine dehydrogenase 0.99 HEPCGN_11435 nrfC cytochrome c nitrite reductase Fe-S protein low > 87
Escherichia coli ECRC100 0.99 OKFHMN_15855 yiaY L-threonine dehydrogenase 1.00 OKFHMN_12810 nrfC cytochrome c nitrite reductase Fe-S protein low > 80
Escherichia coli Nissle 1917 0.98 ECOLIN_RS20505 L-threonine dehydrogenase 0.99 ECOLIN_RS23565 cytochrome c nitrite reductase Fe-S protein low > 55
Serratia liquefaciens MT49 0.74 IAI46_19495 L-threonine dehydrogenase 0.28 IAI46_04870 tetrathionate reductase subunit TtrB low > 86
Dickeya dianthicola ME23 0.69 DZA65_RS12440 L-threonine dehydrogenase 0.59 DZA65_RS04465 4Fe-4S dicluster domain-containing protein low > 75
Dickeya dianthicola 67-19 0.69 HGI48_RS11990 L-threonine dehydrogenase 0.59 HGI48_RS04545 4Fe-4S dicluster domain-containing protein low > 71
Shewanella amazonensis SB2B 0.68 Sama_2455 alcohol dehydrogenase II (RefSeq) 0.60 Sama_2903 NrfC, Fe-S-cluster-containing hydrogenase component 1 (RefSeq) low > 62
Shewanella loihica PV-4 0.68 Shew_1166 iron-containing alcohol dehydrogenase (RefSeq) 0.60 Shew_3157 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein (RefSeq) low > 60
Shewanella sp. ANA-3 0.67 Shewana3_2938 iron-containing alcohol dehydrogenase (RefSeq) 0.58 Shewana3_3961 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein (RefSeq) 0.59 69
Dickeya dadantii 3937 0.67 DDA3937_RS11900 L-threonine dehydrogenase 0.59 DDA3937_RS04585 4Fe-4S dicluster domain-containing protein low > 74
Shewanella oneidensis MR-1 0.66 SO1490 adhB alcohol dehydrogenase II (NCBI ptt file) 0.48 SO4061 psrB polysulfide reductase, subunit B (NCBI ptt file) low > 76
Desulfovibrio vulgaris Miyazaki F 0.53 DvMF_0321 iron-containing alcohol dehydrogenase (RefSeq) 0.23 DvMF_0067 4Fe-4S ferredoxin iron-sulfur binding domain protein (RefSeq) — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.43 GFF2262 Lactaldehyde dehydrogenase involved in fucose or rhamnose utilization (EC 1.2.1.22) 0.92 GFF1455 NrfC protein low > 78
Azospirillum brasilense Sp245 0.27 AZOBR_RS28580 alcohol dehydrogenase 0.31 AZOBR_RS23550 tetrathionate reductase subunit B low > 97
Variovorax sp. SCN45 0.24 GFF25 Alcohol dehydrogenase (EC 1.1.1.1) 0.27 GFF3158 Sulfite dehydrogenase (quinone), iron-sulfur subunit SoeB (EC 1.8.5.6) low > 127

Not shown: 39 genomes with orthologs for ECD_03444 only; 3 genomes with orthologs for ECD_03944 only