Conservation of cofitness between ECD_03243 and ECD_03624 in Escherichia coli BL21

29 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BL21 1.0 ECD_03243 DNA catabolic putative fimbrial transporter 1.0 ECD_03624 16S rRNA m(7)G527 methyltransferase, SAM-dependent; glucose-inhibited cell-division protein 0.73 7
Escherichia coli BW25113 1.00 b3391 hofQ predicted fimbrial transporter (NCBI) 1.00 b3740 gidB glucose-inhibited division protein B (NCBI) 0.38 18
Escherichia coli Nissle 1917 0.98 ECOLIN_RS19370 DNA uptake porin HofQ 1.00 ECOLIN_RS21510 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG low > 55
Escherichia coli ECOR27 0.98 NOLOHH_08895 hofQ DNA uptake porin HofQ 1.00 NOLOHH_06925 rsmG 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG low > 75
Escherichia coli ECRC62 0.97 BNILDI_02625 hofQ DNA uptake porin HofQ 1.00 BNILDI_04600 rsmG 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG low > 75
Escherichia coli ECRC98 0.97 JDDGAC_20735 hofQ DNA uptake porin HofQ 1.00 JDDGAC_18410 rsmG 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG low > 86
Escherichia coli ECRC101 0.97 MCAODC_07635 hofQ DNA uptake porin HofQ 1.00 MCAODC_05295 rsmG 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG low > 87
Escherichia coli ECRC99 0.97 KEDOAH_11035 hofQ DNA uptake porin HofQ 1.00 KEDOAH_13360 rsmG 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG — —
Escherichia coli ECRC102 0.97 NIAGMN_14875 hofQ DNA uptake porin HofQ 1.00 NIAGMN_12545 rsmG 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG — —
Escherichia coli ECRC100 0.97 OKFHMN_17105 hofQ DNA uptake porin HofQ 1.00 OKFHMN_14790 rsmG 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG low > 80
Escherichia coli HS(pFamp)R (ATCC 700891) 0.97 OHPLBJKB_00312 Type IV pilus biogenesis and competence protein PilQ 1.00 OHPLBJKB_04313 Ribosomal RNA small subunit methyltransferase G low > 73
Escherichia coli ECOR38 0.96 HEPCGN_15925 hofQ DNA uptake porin HofQ 0.99 HEPCGN_13505 rsmG 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG low > 87
Escherichia fergusonii Becca 0.95 EFB2_00437 Type IV pilus biogenesis and competence protein PilQ 1.00 EFB2_04893 Ribosomal RNA small subunit methyltransferase G low > 86
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.81 GFF628 Type IV pilus biogenesis protein PilQ 0.88 GFF1717 rRNA small subunit 7-methylguanosine (m7G) methyltransferase GidB low > 78
Enterobacter asburiae PDN3 0.73 EX28DRAFT_4151 type IV pilus secretin (or competence protein) PilQ 0.86 EX28DRAFT_4016 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG low > 76
Enterobacter sp. TBS_079 0.72 MPMX20_04280 Type IV pilus biogenesis and competence protein PilQ 0.86 MPMX20_04627 Ribosomal RNA small subunit methyltransferase G low > 85
Klebsiella michiganensis M5al 0.67 BWI76_RS26100 DNA transporter HofQ 0.82 BWI76_RS00225 16S rRNA methyltransferase G low > 92
Pectobacterium carotovorum WPP14 0.49 HER17_RS01770 DNA uptake porin HofQ 0.75 HER17_RS21605 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG low > 75
Pantoea sp. MT58 0.49 IAI47_01885 DNA uptake porin HofQ 0.78 IAI47_00295 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG low > 76
Erwinia tracheiphila SCR3 0.49 LU632_RS22875 hofQ DNA uptake porin HofQ 0.71 LU632_RS24810 rsmG 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG low > 74
Dickeya dianthicola ME23 0.48 DZA65_RS20770 DNA uptake porin HofQ 0.75 DZA65_RS22365 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG low > 75
Dickeya dianthicola 67-19 0.48 HGI48_RS19685 DNA uptake porin HofQ 0.75 HGI48_RS21385 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG low > 71
Dickeya dadantii 3937 0.48 DDA3937_RS19555 DNA uptake porin HofQ 0.75 DDA3937_RS21600 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG low > 74
Rahnella sp. WP5 0.47 EX31_RS04730 DNA uptake porin HofQ 0.76 EX31_RS06135 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG low > 89
Serratia liquefaciens MT49 0.46 IAI46_23715 DNA uptake porin HofQ 0.78 IAI46_25115 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG low > 86
Pseudomonas putida KT2440 0.27 PP_5080 type 4 pili biogenesis protein 0.47 PP_0003 16S RNA methyltransferase low > 96
Pseudomonas fluorescens SBW25 0.25 PFLU_RS02020 type IV pilus secretin PilQ family protein 0.47 PFLU_RS30170 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG low > 109
Pseudomonas fluorescens SBW25-INTG 0.25 PFLU_RS02020 type IV pilus secretin PilQ family protein 0.47 PFLU_RS30170 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG low > 109
Pseudomonas simiae WCS417 0.24 PS417_01975 pilus assembly protein PilQ 0.46 PS417_28515 16S rRNA methyltransferase low > 88
Desulfovibrio vulgaris Hildenborough JW710 0.20 DVU1273 bacterial type II/III secretion system protein (TIGR) 0.20 DVU1250 gidB methyltransferase GidB (TIGR) low > 55

Not shown: 0 genomes with orthologs for ECD_03243 only; 48 genomes with orthologs for ECD_03624 only