Conservation of cofitness between ECD_00807 and ECD_03025 in Escherichia coli BL21

27 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BL21 1.0 ECD_00807 deoxyribose-5-phosphate-inducible deoxyribose operon transcriptional repressor; repressor of nupG and tsx 1.0 ECD_03025 U32 peptidase family protein 0.50 7
Escherichia coli ECOR38 1.00 HEPCGN_01995 deoR DNA-binding transcriptional repressor DeoR 1.00 HEPCGN_17050 protease low > 85
Escherichia coli Nissle 1917 1.00 ECOLIN_RS04465 DNA-binding transcriptional repressor DeoR 1.00 ECOLIN_RS18140 peptidase U32 family protein — —
Escherichia coli ECRC99 1.00 KEDOAH_21875 deoR DNA-binding transcriptional repressor DeoR 1.00 KEDOAH_09975 protease — —
Escherichia coli ECRC98 1.00 JDDGAC_09670 deoR DNA-binding transcriptional repressor DeoR 1.00 JDDGAC_21800 protease — —
Escherichia coli BW25113 1.00 b0840 deoR DNA-binding transcriptional repressor (NCBI) 1.00 b3158 yhbU predicted peptidase (collagenase-like) (NCBI) low > 76
Escherichia fergusonii Becca 1.00 EFB2_03266 Deoxyribose operon repressor 0.99 EFB2_00665 putative protease YhbU low > 86
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_02870 Deoxyribose operon repressor 1.00 OHPLBJKB_00542 putative protease YhbU low > 73
Escherichia coli ECRC101 1.00 MCAODC_25250 deoR DNA-binding transcriptional repressor DeoR 1.00 MCAODC_08695 protease — —
Escherichia coli ECRC102 1.00 NIAGMN_04080 deoR DNA-binding transcriptional repressor DeoR 1.00 NIAGMN_15935 ubiU Ubiquinone biosynthesis protein UbiU — —
Escherichia coli ECRC101 1.00 OKFHMN_06035 deoR DNA-binding transcriptional repressor DeoR 1.00 OKFHMN_18175 protease — —
Escherichia coli ECOR27 1.00 NOLOHH_22405 deoR DNA-binding transcriptional repressor DeoR 1.00 NOLOHH_09975 ubiU Ubiquinone biosynthesis protein UbiU low > 57
Escherichia coli ECRC62 1.00 BNILDI_20665 deoR DNA-binding transcriptional repressor DeoR 1.00 BNILDI_01555 ubiU Ubiquinone biosynthesis protein UbiU — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.85 GFF745 Deoxyribose operon repressor, DeoR family 0.97 GFF1510 FIG139552: Putative protease low > 78
Enterobacter sp. TBS_079 0.84 MPMX20_01478 Deoxyribose operon repressor 0.94 MPMX20_04062 putative protease YhbU low > 85
Enterobacter asburiae PDN3 0.83 EX28DRAFT_2126 transcriptional regulator, DeoR family 0.94 EX28DRAFT_3207 Collagenase and related proteases low > 76
Klebsiella michiganensis M5al 0.79 BWI76_RS09150 DNA-binding transcriptional repressor DeoR 0.98 BWI76_RS24970 peptidase U32 low > 92
Serratia liquefaciens MT49 0.57 IAI46_08300 DNA-binding transcriptional repressor DeoR 0.87 IAI46_02015 U32 family peptidase low > 86
Pectobacterium carotovorum WPP14 0.56 HER17_RS12540 DNA-binding transcriptional repressor DeoR 0.91 HER17_RS18160 U32 family peptidase low > 75
Dickeya dadantii 3937 0.55 DDA3937_RS09425 DNA-binding transcriptional repressor DeoR 0.89 DDA3937_RS03115 U32 family peptidase low > 74
Dickeya dianthicola ME23 0.55 DZA65_RS09750 DNA-binding transcriptional repressor DeoR 0.89 DZA65_RS03285 U32 family peptidase low > 75
Dickeya dianthicola 67-19 0.54 HGI48_RS09440 DNA-binding transcriptional repressor DeoR 0.88 HGI48_RS03290 U32 family peptidase low > 71
Pantoea sp. MT58 0.54 IAI47_16320 DNA-binding transcriptional repressor DeoR 0.83 IAI47_16965 U32 family peptidase low > 76
Rahnella sp. WP5 0.53 EX31_RS24185 DNA-binding transcriptional repressor DeoR 0.91 EX31_RS08480 U32 family peptidase low > 89
Rhodospirillum rubrum S1H 0.36 Rru_A2304 Transcriptional Regulator, DeoR family (NCBI) 0.43 Rru_A2525 Peptidase U32 (NCBI) — —
Azospirillum sp. SherDot2 0.31 MPMX19_02950 Deoxyribose operon repressor 0.44 MPMX19_03049 putative protease YhbU low > 112
Sinorhizobium meliloti 1021 0.31 SM_b21299 DeoR family transcriptional regulator 0.43 SMa1291 Protease low > 103
Agrobacterium fabrum C58 0.28 Atu4841 DeoR family transcriptional regulator 0.43 Atu4397 protease low > 89

Not shown: 6 genomes with orthologs for ECD_00807 only; 25 genomes with orthologs for ECD_03025 only