Conservation of cofitness between ECD_03303 and ECD_02870 in Escherichia coli BL21

22 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BL21 1.0 ECD_03303 branched-chain amino acid ABC transporter ATPase 1.0 ECD_02870 hydrogenase 2, large subunit 0.64 7
Escherichia coli ECRC98 1.00 JDDGAC_20390 livF high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivF 1.00 JDDGAC_22655 hybC hydrogenase 2 large subunit low > 86
Escherichia coli ECOR27 1.00 NOLOHH_08555 livF high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivF 1.00 NOLOHH_10795 hybC hydrogenase 2 large subunit low > 75
Escherichia coli Nissle 1917 1.00 ECOLIN_RS19755 high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivF 1.00 ECOLIN_RS17250 hydrogenase 2 large subunit low > 55
Escherichia fergusonii Becca 1.00 EFB2_00368 High-affinity branched-chain amino acid transport ATP-binding protein LivF 1.00 EFB2_00813 Hydrogenase-2 large chain low > 86
Escherichia coli ECRC100 1.00 OKFHMN_16760 livF high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivF 1.00 OKFHMN_19020 hybC hydrogenase 2 large subunit low > 80
Escherichia coli ECRC99 1.00 KEDOAH_11380 livF high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivF 1.00 KEDOAH_09125 hybC hydrogenase 2 large subunit — —
Escherichia coli ECRC102 1.00 NIAGMN_14530 livF high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivF 1.00 NIAGMN_16785 hybC hydrogenase 2 large subunit — —
Escherichia coli ECRC62 1.00 BNILDI_02950 livF high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivF 1.00 BNILDI_00720 hybC hydrogenase 2 large subunit low > 75
Escherichia coli ECRC101 1.00 MCAODC_07290 livF high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivF 1.00 MCAODC_09535 hybC hydrogenase 2 large subunit 0.51 26
Escherichia coli BW25113 1.00 b3454 livF ATP-binding component of leucine transport (VIMSS) 1.00 b2994 hybC hydrogenase 2, large subunit (NCBI) low > 76
Escherichia coli ECOR38 1.00 HEPCGN_15580 livF high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivF 1.00 HEPCGN_17880 hybC hydrogenase 2 large subunit low > 87
Escherichia coli HS(pFamp)R (ATCC 700891) 0.99 OHPLBJKB_00249 High-affinity branched-chain amino acid transport ATP-binding protein LivF 1.00 OHPLBJKB_00705 Hydrogenase-2 large chain low > 73
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.97 GFF552 Branched-chain amino acid transport ATP-binding protein LivF (TC 3.A.1.4.1) 0.95 GFF3105 Uptake hydrogenase large subunit (EC 1.12.99.6) low > 78
Dickeya dadantii 3937 0.88 DDA3937_RS00680 high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivF 0.78 DDA3937_RS14240 hydrogenase 2 large subunit low > 74
Dickeya dianthicola 67-19 0.88 HGI48_RS20710 high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivF 0.78 HGI48_RS14215 hydrogenase 2 large subunit low > 71
Azospirillum brasilense Sp245 0.58 AZOBR_RS08250 L-proline and D-alanine ABC transporter, ATPase component 2 (from data) 0.60 AZOBR_RS20390 hydrogenase 2 large subunit low > 97
Magnetospirillum magneticum AMB-1 0.58 AMB_RS09120 ABC transporter ATP-binding protein 0.61 AMB_RS08335 nickel-dependent hydrogenase large subunit low > 64
Desulfovibrio vulgaris Miyazaki F 0.51 DvMF_2754 ABC transporter related (RefSeq) 0.39 DvMF_0270 nickel-dependent hydrogenase large subunit (RefSeq) low > 51
Desulfovibrio vulgaris Hildenborough JW710 0.51 DVU0716 livF branched-chain amino acid ABC transporter, ATP-binding protein (TIGR) 0.39 DVU1922 hynA-1 periplasmic [NiFe] hydrogenase, large subunit, isozyme 1 (TIGR) low > 55
Dechlorosoma suillum PS 0.48 Dsui_2057 ABC-type branched-chain amino acid transport systems, ATPase component 0.60 Dsui_3009 Ni,Fe-hydrogenase I large subunit low > 51
Synechococcus elongatus PCC 7942 0.46 Synpcc7942_2492 livF ATPase 0.07 Synpcc7942_2555 hoxH NAD-reducing hydrogenase HoxS beta subunit low > 38
Shewanella loihica PV-4 0.41 Shew_2606 ABC transporter-related protein (RefSeq) 0.39 Shew_1764 nickel-dependent hydrogenase, large subunit (RefSeq) low > 60

Not shown: 50 genomes with orthologs for ECD_03303 only; 5 genomes with orthologs for ECD_02870 only