Conservation of cofitness between ECD_03135 and ECD_02475 in Escherichia coli BL21

26 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BL21 1.0 ECD_03135 DUF494 family putative periplasmic protein 1.0 ECD_02475 putative methyltransferase 0.34 41
Escherichia coli BW25113 1.00 b3284 smg hypothetical protein (NCBI) 1.00 b2581 yfiF predicted methyltransferase (NCBI) low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_00419 Protein Smg 1.00 OHPLBJKB_01125 putative tRNA/rRNA methyltransferase YfiF low > 73
Escherichia coli ECRC101 0.98 MCAODC_08070 smg DUF494 domain-containing protein 1.00 MCAODC_11865 yfiF tRNA/rRNA methyltransferase low > 87
Escherichia coli ECRC102 0.98 NIAGMN_15310 smg DUF494 domain-containing protein 1.00 NIAGMN_19105 yfiF tRNA/rRNA methyltransferase — —
Escherichia coli ECOR27 0.98 NOLOHH_09340 smg DUF494 domain-containing protein 1.00 NOLOHH_13005 yfiF tRNA/rRNA methyltransferase low > 75
Escherichia coli ECRC100 0.98 OKFHMN_17550 smg DUF494 domain-containing protein 1.00 OKFHMN_21335 yfiF tRNA/rRNA methyltransferase low > 80
Escherichia coli Nissle 1917 0.98 ECOLIN_RS18855 DUF494 family protein Smg 0.99 ECOLIN_RS14605 tRNA/rRNA methyltransferase — —
Escherichia coli ECRC98 0.98 JDDGAC_21170 smg DUF494 domain-containing protein 1.00 JDDGAC_25000 yfiF tRNA/rRNA methyltransferase low > 86
Escherichia coli ECRC99 0.98 KEDOAH_10600 smg DUF494 domain-containing protein 1.00 KEDOAH_06885 yfiF tRNA/rRNA methyltransferase — —
Escherichia fergusonii Becca 0.98 EFB2_00539 Protein Smg 0.99 EFB2_01315 putative tRNA/rRNA methyltransferase YfiF low > 86
Escherichia coli ECRC62 0.98 BNILDI_02180 smg DUF494 domain-containing protein 1.00 BNILDI_11810 yfiF tRNA/rRNA methyltransferase low > 75
Escherichia coli ECOR38 0.97 HEPCGN_16370 smg DUF494 domain-containing protein 1.00 HEPCGN_20460 yfiF tRNA/rRNA methyltransferase low > 87
Enterobacter asburiae PDN3 0.95 EX28DRAFT_0043 Uncharacterized protein conserved in bacteria 0.82 EX28DRAFT_0066 rRNA methylases low > 76
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.95 GFF2394 Protein of unknown function Smg 0.89 GFF2099 hypothetical tRNA/rRNA methyltransferase yfiF [EC:2.1.1.-] low > 78
Enterobacter sp. TBS_079 0.95 MPMX20_04192 Protein Smg 0.82 MPMX20_03450 putative tRNA/rRNA methyltransferase YfiF low > 85
Klebsiella michiganensis M5al 0.93 BWI76_RS25660 hypothetical protein 0.81 BWI76_RS21385 tRNA/rRNA methyltransferase low > 92
Erwinia tracheiphila SCR3 0.86 LU632_RS22460 smg DUF494 family protein Smg 0.66 LU632_RS16870 tRNA/rRNA methyltransferase low > 74
Pantoea sp. MT58 0.85 IAI47_02300 DUF494 domain-containing protein 0.67 IAI47_04490 tRNA/rRNA methyltransferase low > 76
Serratia liquefaciens MT49 0.79 IAI46_23255 DUF494 domain-containing protein 0.65 IAI46_20010 tRNA/rRNA methyltransferase low > 86
Pectobacterium carotovorum WPP14 0.78 HER17_RS02235 DUF494 family protein 0.62 HER17_RS04445 tRNA/rRNA methyltransferase low > 75
Dickeya dianthicola ME23 0.76 DZA65_RS20330 DUF494 domain-containing protein 0.62 DZA65_RS17915 tRNA/rRNA methyltransferase low > 75
Dickeya dianthicola 67-19 0.76 HGI48_RS19205 DUF494 domain-containing protein 0.61 HGI48_RS16840 tRNA/rRNA methyltransferase low > 71
Rahnella sp. WP5 0.75 EX31_RS15965 DUF494 domain-containing protein 0.62 EX31_RS13665 tRNA/rRNA methyltransferase low > 89
Dickeya dadantii 3937 0.74 DDA3937_RS19115 DUF494 domain-containing protein 0.63 DDA3937_RS16770 tRNA/rRNA methyltransferase low > 74
Shewanella amazonensis SB2B 0.54 Sama_0046 hypothetical protein (RefSeq) 0.35 Sama_2526 putative methyltransferase (RefSeq) low > 62
Xanthomonas campestris pv. campestris strain 8004 0.38 Xcc-8004.4747.1 Protein of unknown function Smg 0.23 Xcc-8004.1266.1 hypothetical tRNA/rRNA methyltransferase yfiF [EC:2.1.1.-] low > 74

Not shown: 12 genomes with orthologs for ECD_03135 only; 1 genomes with orthologs for ECD_02475 only