Conservation of cofitness between ECD_02276 and ECD_02289 in Escherichia coli BL21

25 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BL21 1.0 ECD_02276 D-serine dehydratase 1.0 ECD_02289 glutamate-pyruvate aminotransferase; glutamic-pyruvic transaminase (GPT); alanine transaminase 0.77 6
Escherichia coli ECRC62 1.00 BNILDI_12985 dsdA D-serine ammonia-lyase 1.00 BNILDI_12910 alaC alanine transaminase low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_01355 D-serine dehydratase 1.00 OHPLBJKB_01342 Glutamate-pyruvate aminotransferase AlaC low > 73
Escherichia coli ECOR27 1.00 NOLOHH_14130 dsdA D-serine ammonia-lyase 1.00 NOLOHH_14055 alaC alanine transaminase low > 75
Escherichia coli BW25113 1.00 b2366 dsdA D-serine dehydratase (NCBI) 1.00 b2379 yfdZ hypothetical protein (NCBI) low > 76
Escherichia coli ECRC99 0.99 KEDOAH_05775 dsdA D-serine ammonia-lyase 1.00 KEDOAH_05850 alaC alanine transaminase — —
Escherichia coli ECRC98 0.99 JDDGAC_26410 dsdA D-serine ammonia-lyase 1.00 JDDGAC_26335 alaC alanine transaminase low > 86
Escherichia coli ECRC102 0.99 NIAGMN_20225 dsdA D-serine ammonia-lyase 1.00 NIAGMN_20145 alaC alanine transaminase — —
Escherichia coli ECRC101 0.99 MCAODC_12980 dsdA D-serine ammonia-lyase 1.00 MCAODC_12900 alaC alanine transaminase low > 87
Escherichia coli ECRC100 0.99 OKFHMN_22450 dsdA D-serine ammonia-lyase 1.00 OKFHMN_22370 alaC alanine transaminase low > 80
Escherichia fergusonii Becca 0.99 EFB2_04196 D-serine dehydratase 1.00 EFB2_01495 Glutamate-pyruvate aminotransferase AlaC low > 86
Escherichia coli Nissle 1917 0.99 ECOLIN_RS13620 D-serine ammonia-lyase 1.00 ECOLIN_RS13690 alanine transaminase low > 55
Escherichia coli ECOR38 0.99 HEPCGN_21655 dsdA D-serine ammonia-lyase 1.00 HEPCGN_21580 alaC alanine transaminase low > 87
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.87 GFF293 D-serine dehydratase (EC 4.3.1.18) 0.96 GFF1970 Uncharacterized PLP-dependent aminotransferase YfdZ low > 78
Klebsiella michiganensis M5al 0.87 BWI76_RS27860 D-serine dehydratase 0.96 BWI76_RS20495 alanine transaminase low > 92
Enterobacter asburiae PDN3 0.82 EX28DRAFT_3966 D-serine ammonia-lyase (EC 4.3.1.18) 0.94 EX28DRAFT_0240 Aspartate/tyrosine/aromatic aminotransferase low > 76
Enterobacter sp. TBS_079 0.81 MPMX20_00023 D-serine dehydratase 0.94 MPMX20_03277 Glutamate-pyruvate aminotransferase AlaC low > 85
Serratia liquefaciens MT49 0.69 IAI46_12905 D-serine ammonia-lyase 0.90 IAI46_18180 alanine transaminase low > 86
Paraburkholderia sabiae LMG 24235 0.62 QEN71_RS41275 D-serine ammonia-lyase 0.16 QEN71_RS03275 pyridoxal phosphate-dependent aminotransferase low > 153
Pseudomonas fluorescens GW456-L13 0.61 PfGW456L13_3648 D-serine ammonia-lyase (EC 4.3.1.18) (from data) 0.87 PfGW456L13_1928 Uncharacterized PLP-dependent aminotransferase YfdZ low > 87
Pseudomonas fluorescens FW300-N2E3 0.60 AO353_25210 D-serine ammonia-lyase (EC 4.3.1.18) (from data) 0.86 AO353_03235 glutamate-pyruvate aminotransferase low > 101
Dickeya dianthicola 67-19 0.58 HGI48_RS21080 D-serine ammonia-lyase 0.89 HGI48_RS14755 alanine transaminase low > 71
Dickeya dadantii 3937 0.57 DDA3937_RS00280 D-serine ammonia-lyase 0.89 DDA3937_RS14825 alanine transaminase low > 74
Castellaniella sp019104865 MT123 0.41 ABCV34_RS13655 D-serine ammonia-lyase 0.78 ABCV34_RS02290 alanine transaminase low > 48
Cupriavidus basilensis FW507-4G11 0.40 RR42_RS28450 serine dehydratase 0.81 RR42_RS28540 glutamate--pyruvate aminotransferase low > 128
Acidovorax sp. GW101-3H11 0.37 Ac3H11_4130 D-serine dehydratase (EC 4.3.1.18) 0.82 Ac3H11_3720 Uncharacterized PLP-dependent aminotransferase YfdZ low > 79

Not shown: 3 genomes with orthologs for ECD_02276 only; 51 genomes with orthologs for ECD_02289 only