Conservation of cofitness between ECD_00898 and ECD_01604 in Escherichia coli BL21

21 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BL21 1.0 ECD_00898 dimethyl sulfoxide reductase, anaerobic, subunit A 1.0 ECD_01604 dipeptide and tripeptide permease A 0.83 3
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_02774 Dimethyl sulfoxide reductase DmsA 1.00 OHPLBJKB_02091 Dipeptide and tripeptide permease A low > 73
Escherichia coli BW25113 1.00 b0894 dmsA anaerobic dimethyl sulfoxide reductase subunit A (VIMSS) 1.00 b1634 tppB putative tripeptide transporter permease (NCBI) low > 76
Escherichia coli ECRC101 1.00 MCAODC_24935 dmsA dimethylsulfoxide reductase subunit A 0.99 MCAODC_17895 dtpA dipeptide/tripeptide permease DtpA — —
Escherichia coli ECRC98 1.00 JDDGAC_09355 dmsA dimethylsulfoxide reductase subunit A 1.00 JDDGAC_02105 dtpA dipeptide/tripeptide permease DtpA — —
Escherichia coli ECRC101 1.00 OKFHMN_05545 dmsA dimethylsulfoxide reductase subunit A 1.00 OKFHMN_27515 dtpA dipeptide/tripeptide permease DtpA — —
Escherichia coli ECRC102 1.00 NIAGMN_03265 dmsA dimethylsulfoxide reductase subunit A 1.00 NIAGMN_00550 dtpA dipeptide/tripeptide permease DtpA — —
Escherichia coli ECRC99 1.00 KEDOAH_22190 dmsA dimethylsulfoxide reductase subunit A 1.00 KEDOAH_00590 dtpA dipeptide/tripeptide permease DtpA — —
Escherichia coli ECOR27 1.00 NOLOHH_22115 dmsA dimethylsulfoxide reductase subunit A 1.00 NOLOHH_18035 dtpA dipeptide/tripeptide permease DtpA — —
Escherichia coli ECRC62 1.00 BNILDI_20370 dmsA dimethylsulfoxide reductase subunit A 1.00 BNILDI_16825 dtpA dipeptide/tripeptide permease DtpA — —
Escherichia coli ECOR38 1.00 HEPCGN_22965 dmsA dimethylsulfoxide reductase subunit A 1.00 HEPCGN_05900 dtpA dipeptide/tripeptide permease DtpA low > 85
Escherichia coli Nissle 1917 0.99 ECOLIN_RS04755 dimethylsulfoxide reductase subunit A 1.00 ECOLIN_RS09120 dipeptide/tripeptide permease DtpA — —
Escherichia fergusonii Becca 0.99 EFB2_03167 Dimethyl sulfoxide reductase DmsA 1.00 EFB2_02358 Dipeptide and tripeptide permease A low > 86
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.93 GFF4898 Anaerobic dimethyl sulfoxide reductase chain A (EC 1.8.99.-) 0.93 GFF3640 Di/tripeptide permease DtpA low > 78
Enterobacter asburiae PDN3 0.89 EX28DRAFT_2038 anaerobic dimethyl sulfoxide reductase, A subunit, DmsA/YnfE family 0.87 EX28DRAFT_1630 amino acid/peptide transporter (Peptide:H+ symporter), bacterial low > 76
Enterobacter sp. TBS_079 0.89 MPMX20_01556 Dimethyl sulfoxide reductase DmsA 0.88 MPMX20_02004 Dipeptide and tripeptide permease A low > 85
Klebsiella michiganensis M5al 0.89 BWI76_RS09680 dimethyl sulfoxide reductase subunit A 0.92 BWI76_RS16390 dipeptide/tripeptide permease A low > 92
Rahnella sp. WP5 0.82 EX31_RS18500 dimethylsulfoxide reductase subunit A 0.77 EX31_RS15730 dipeptide/tripeptide permease DtpA low > 89
Shewanella oneidensis MR-1 0.38 SO1429 dmaA-1 anaerobic dimethyl sulfoxide reductase, A subunit (NCBI ptt file) 0.34 SO1277 proton-dependent oligopeptide transporter (POT) family protein (NCBI ptt file) low > 76
Paraburkholderia graminis OAS925 0.13 ABIE53_003626 anaerobic selenocysteine-containing dehydrogenase 0.35 ABIE53_004167 POT family proton-dependent oligopeptide transporter low > 113
Paraburkholderia sabiae LMG 24235 0.13 QEN71_RS27460 molybdopterin oxidoreductase family protein 0.36 QEN71_RS18370 oligopeptide:H+ symporter 0.67 39
Paraburkholderia bryophila 376MFSha3.1 0.12 H281DRAFT_06225 Anaerobic selenocysteine-containing dehydrogenase 0.33 H281DRAFT_03131 proton-dependent oligopeptide transporter, POT family low > 103

Not shown: 15 genomes with orthologs for ECD_00898 only; 17 genomes with orthologs for ECD_01604 only