Conservation of cofitness between ECD_01302 and ECD_01310 in Escherichia coli BL21

27 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BL21 1.0 ECD_01302 L-Ala-D/L-Glu epimerase 1.0 ECD_01310 stress-induced protein 0.72 3
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_02357 L-Ala-D/L-Glu epimerase 1.00 OHPLBJKB_02349 Universal stress protein E low > 73
Escherichia coli BW25113 1.00 b1325 ycjG putative muconate cycloisomerase I (EC 5.5.-.-) (VIMSS) 1.00 b1333 uspE stress-induced protein (NCBI) low > 76
Escherichia coli ECOR27 1.00 NOLOHH_19990 ycjG L-Ala-D/L-Glu epimerase 1.00 NOLOHH_19945 uspE universal stress protein UspE — —
Escherichia coli ECRC102 0.99 NIAGMN_26465 ycjG L-Ala-D/L-Glu epimerase 1.00 NIAGMN_26415 uspE universal stress protein UspE — —
Escherichia coli ECRC98 0.99 JDDGAC_04840 ycjG L-Ala-D/L-Glu epimerase 1.00 JDDGAC_04790 uspE universal stress protein UspE — —
Escherichia coli ECRC99 0.99 KEDOAH_26480 ycjG L-Ala-D/L-Glu epimerase 1.00 KEDOAH_26525 uspE universal stress protein UspE — —
Escherichia fergusonii Becca 0.99 EFB2_02602 L-Ala-D/L-Glu epimerase 1.00 EFB2_02594 Universal stress protein E low > 86
Escherichia coli ECRC101 0.99 OKFHMN_02295 ycjG L-Ala-D/L-Glu epimerase 1.00 OKFHMN_02245 uspE universal stress protein UspE — —
Escherichia coli ECRC101 0.99 MCAODC_15975 ycjG L-Ala-D/L-Glu epimerase 1.00 MCAODC_16025 uspE universal stress protein UspE — —
Escherichia coli Nissle 1917 0.99 ECOLIN_RS07955 L-Ala-D/L-Glu epimerase 1.00 ECOLIN_RS08000 universal stress protein UspE — —
Escherichia coli ECOR38 0.99 HEPCGN_25895 ycjG L-Ala-D/L-Glu epimerase 1.00 HEPCGN_25920 uspE universal stress protein UspE low > 85
Escherichia coli ECRC62 0.99 BNILDI_18140 ycjG L-Ala-D/L-Glu epimerase 1.00 BNILDI_18095 uspE universal stress protein UspE — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.83 GFF2677 L-alanine-DL-glutamate epimerase 0.96 GFF2657 Universal stress protein E low > 78
Klebsiella michiganensis M5al 0.79 BWI76_RS12500 dipeptide epimerase 0.93 BWI76_RS16190 universal stress protein UspE low > 92
Enterobacter sp. TBS_079 0.79 MPMX20_02451 L-Ala-D/L-Glu epimerase 0.95 MPMX20_02033 Universal stress protein E low > 85
Enterobacter asburiae PDN3 0.76 EX28DRAFT_0997 L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily 0.94 EX28DRAFT_1542 Universal stress protein UspA and related nucleotide-binding proteins low > 76
Serratia liquefaciens MT49 0.72 IAI46_13460 L-Ala-D/L-Glu epimerase 0.85 IAI46_13265 universal stress protein UspE low > 86
Pantoea sp. MT58 0.72 IAI47_09450 L-Ala-D/L-Glu epimerase 0.84 IAI47_09575 universal stress protein UspE low > 76
Rahnella sp. WP5 0.67 EX31_RS06345 L-Ala-D/L-Glu epimerase 0.83 EX31_RS07205 universal stress protein UspE low > 89
Dickeya dianthicola 67-19 0.44 HGI48_RS00655 L-Ala-D/L-Glu epimerase 0.81 HGI48_RS10905 universal stress protein UspE low > 71
Dickeya dadantii 3937 0.44 DDA3937_RS20560 L-Ala-D/L-Glu epimerase 0.83 DDA3937_RS10955 universal stress protein UspE low > 74
Dickeya dianthicola ME23 0.44 DZA65_RS00710 L-Ala-D/L-Glu epimerase 0.81 DZA65_RS11365 universal stress protein UspE low > 75
Pectobacterium carotovorum WPP14 0.44 HER17_RS06650 L-Ala-D/L-Glu epimerase 0.83 HER17_RS10520 universal stress protein UspE low > 75
Pseudomonas putida KT2440 0.10 PP_3715 Muconate cycloisomerase 1 0.19 PP_2187 Universal stress protein family low > 96
Pseudomonas fluorescens SBW25 0.10 PFLU_RS25480 muconate cycloisomerase 0.20 PFLU_RS17010 universal stress protein A low > 109
Pseudomonas fluorescens SBW25-INTG 0.10 PFLU_RS25480 muconate cycloisomerase 0.20 PFLU_RS17010 universal stress protein A low > 109
Pseudomonas fluorescens FW300-N2E3 0.09 AO353_23515 muconate cycloisomerase 0.22 AO353_22950 universal stress protein UspA low > 101

Not shown: 27 genomes with orthologs for ECD_01302 only; 16 genomes with orthologs for ECD_01310 only