Conservation of cofitness between ECD_03871 and ECD_00184 in Escherichia coli BL21

22 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BL21 1.0 ECD_03871 phosphomethylpyrimidine synthase 1.0 ECD_00184 lysine decarboxylase 2, constitutive low > 61
Escherichia coli ECRC102 0.99 NIAGMN_11125 thiC phosphomethylpyrimidine synthase ThiC 1.00 NIAGMN_07975 ldcC lysine decarboxylase LdcC — —
Escherichia coli ECRC100 0.99 OKFHMN_13375 thiC phosphomethylpyrimidine synthase ThiC 1.00 OKFHMN_10125 ldcC lysine decarboxylase LdcC low > 80
Escherichia coli ECRC98 0.99 JDDGAC_17000 thiC phosphomethylpyrimidine synthase ThiC 1.00 JDDGAC_13720 ldcC lysine decarboxylase LdcC low > 86
Escherichia coli ECRC101 0.99 MCAODC_03875 thiC phosphomethylpyrimidine synthase ThiC 1.00 MCAODC_00640 ldcC lysine decarboxylase LdcC low > 87
Escherichia coli ECRC99 0.99 KEDOAH_14785 thiC phosphomethylpyrimidine synthase ThiC 1.00 KEDOAH_18030 ldcC lysine decarboxylase LdcC — —
Escherichia coli ECOR27 0.99 NOLOHH_05520 thiC phosphomethylpyrimidine synthase ThiC 1.00 NOLOHH_02470 ldcC lysine decarboxylase LdcC low > 75
Escherichia coli ECRC62 0.99 BNILDI_06005 thiC phosphomethylpyrimidine synthase ThiC 1.00 BNILDI_09200 ldcC lysine decarboxylase LdcC low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.99 OHPLBJKB_04056 Phosphomethylpyrimidine synthase 1.00 OHPLBJKB_03477 Constitutive lysine decarboxylase low > 73
Escherichia coli BW25113 0.99 b3994 thiC thiamine biosynthesis protein ThiC (NCBI) 1.00 b0186 ldcC lysine decarboxylase 2, constitutive (NCBI) low > 76
Escherichia coli Nissle 1917 0.99 ECOLIN_RS23040 phosphomethylpyrimidine synthase ThiC 0.99 ECOLIN_RS01010 lysine decarboxylase LdcC low > 55
Escherichia coli ECOR38 0.99 HEPCGN_12010 thiC phosphomethylpyrimidine synthase ThiC 0.99 HEPCGN_08080 ldcC lysine decarboxylase LdcC low > 87
Escherichia fergusonii Becca 0.99 EFB2_04617 Phosphomethylpyrimidine synthase 0.99 EFB2_03858 Constitutive lysine decarboxylase low > 86
Enterobacter sp. TBS_079 0.95 MPMX20_00217 Phosphomethylpyrimidine synthase 0.90 MPMX20_00870 Constitutive lysine decarboxylase low > 85
Enterobacter asburiae PDN3 0.95 EX28DRAFT_4536 phosphomethylpyrimidine synthase 0.90 EX28DRAFT_3774 Arginine/lysine/ornithine decarboxylases low > 76
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.95 GFF4198 Thiamin biosynthesis protein ThiC 0.92 GFF35 Lysine decarboxylase 2, constitutive (EC 4.1.1.18) low > 78
Klebsiella michiganensis M5al 0.93 BWI76_RS01555 phosphomethylpyrimidine synthase ThiC 0.89 BWI76_RS05300 lysine decarboxylase LdcC low > 92
Rahnella sp. WP5 0.86 EX31_RS16815 phosphomethylpyrimidine synthase ThiC 0.81 EX31_RS12950 lysine decarboxylase LdcC 0.42 6
Serratia liquefaciens MT49 0.84 IAI46_01320 phosphomethylpyrimidine synthase ThiC 0.82 IAI46_20175 lysine decarboxylase LdcC low > 86
Pantoea sp. MT58 0.84 IAI47_18085 phosphomethylpyrimidine synthase ThiC 0.84 IAI47_15445 lysine decarboxylase LdcC low > 76
Herbaspirillum seropedicae SmR1 0.69 HSERO_RS02120 phosphomethylpyrimidine synthase ThiC 0.34 HSERO_RS17280 lysine decarboxylase — —
Kangiella aquimarina DSM 16071 0.67 B158DRAFT_0295 hydroxymethylpyrimidine synthase 0.15 B158DRAFT_0656 Arginine/lysine/ornithine decarboxylases low > 40
Sinorhizobium meliloti 1021 0.63 SM_b20615 thiamine biosynthesis protein ThiC 0.36 SMa0682 decarboxylase (lysine, ornithine, arginine) low > 103

Not shown: 71 genomes with orthologs for ECD_03871 only; 0 genomes with orthologs for ECD_00184 only