Conservation of cofitness between DZA65_RS12240 and DZA65_RS00320 in Dickeya dianthicola ME23

20 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Dickeya dianthicola ME23 1.0 DZA65_RS12240 type III secretion system export apparatus protein SctR 1.0 DZA65_RS00320 xylose ABC transporter ATP-binding protein 0.43 14
Dickeya dianthicola 67-19 1.00 HGI48_RS11755 type III secretion system export apparatus subunit SctR 1.00 HGI48_RS00320 xylose ABC transporter ATP-binding protein low > 71
Dickeya dadantii 3937 0.99 DDA3937_RS11695 type III secretion system export apparatus subunit SctR 0.99 DDA3937_RS20925 xylose ABC transporter ATP-binding protein low > 74
Pectobacterium carotovorum WPP14 0.82 HER17_RS09980 type III secretion system export apparatus subunit SctR 0.86 HER17_RS21075 xylose ABC transporter ATP-binding protein low > 75
Pseudomonas fluorescens FW300-N2E2 0.69 Pf6N2E2_4536 Type III secretion inner membrane protein (YscR,SpaR,HrcR,EscR,homologous to flagellar export components) 0.52 Pf6N2E2_1456 D-xylose transport ATP-binding protein XylG low > 103
Pseudomonas syringae pv. syringae B728a ΔmexB 0.68 Psyr_1208 type III secretion protein HrcR 0.52 Psyr_2885 xylose ABC transporter ATP-binding protein low > 86
Pseudomonas syringae pv. syringae B728a 0.68 Psyr_1208 type III secretion protein HrcR 0.52 Psyr_2885 xylose ABC transporter ATP-binding protein low > 86
Pseudomonas simiae WCS417 0.66 PS417_03490 type III secretion system protein SsaR 0.51 PS417_10935 xylose transporter low > 88
Pseudomonas fluorescens SBW25 0.65 PFLU_RS03550 EscR/YscR/HrcR family type III secretion system export apparatus protein 0.52 PFLU_RS11295 D-xylose ABC transporter ATP-binding protein low > 109
Pseudomonas fluorescens SBW25-INTG 0.65 PFLU_RS03550 EscR/YscR/HrcR family type III secretion system export apparatus protein 0.52 PFLU_RS11295 D-xylose ABC transporter ATP-binding protein low > 109
Herbaspirillum seropedicae SmR1 0.48 HSERO_RS03975 flagellar biosynthesis protein FliP 0.52 HSERO_RS22465 sugar ABC transporter low > 78
Escherichia coli ECRC101 0.41 MCAODC_05800 escR Type III secretion systemminor export apparatus protein EscR 0.80 MCAODC_06460 xylG D-xylose ABC transporter ATP-binding protein low > 87
Escherichia coli ECRC98 0.41 JDDGAC_18915 escR Type III secretion systemminor export apparatus protein EscR 0.80 JDDGAC_19575 xylG D-xylose ABC transporter ATP-binding protein low > 86
Escherichia coli ECRC102 0.41 NIAGMN_13050 escR Type III secretion systemminor export apparatus protein EscR 0.80 NIAGMN_13705 xylG D-xylose ABC transporter ATP-binding protein — —
Escherichia coli ECRC99 0.41 KEDOAH_12855 escR Type III secretion systemminor export apparatus protein EscR 0.80 KEDOAH_12205 xylG D-xylose ABC transporter ATP-binding protein — —
Escherichia coli ECRC100 0.41 OKFHMN_15290 escR Type III secretion systemminor export apparatus protein EscR 0.80 OKFHMN_15945 xylG D-xylose ABC transporter ATP-binding protein — —
Paraburkholderia bryophila 376MFSha3.1 0.38 H281DRAFT_05010 type III secretion protein R 0.53 H281DRAFT_03878 xylose ABC transporter ATP-binding protein low > 103
Paraburkholderia graminis OAS925 0.38 ABIE53_006037 type III secretion protein R 0.53 ABIE53_004931 D-xylose transport system ATP-binding protein low > 113
Escherichia coli ECOR27 0.37 NOLOHH_11670 escR EscR/YscR/HrcR family type III secretion system export apparatus protein 0.80 NOLOHH_07890 xylG D-xylose ABC transporter ATP-binding protein low > 75
Pseudomonas fluorescens FW300-N2C3 0.36 AO356_02705 type III secretion system protein 0.52 AO356_28510 xylose transporter low > 104
Escherichia coli HS(pFamp)R (ATCC 700891) 0.35 OHPLBJKB_00856 Surface presentation of antigens protein SpaP 0.80 OHPLBJKB_00137 Xylose import ATP-binding protein XylG low > 73

Not shown: 4 genomes with orthologs for DZA65_RS12240 only; 30 genomes with orthologs for DZA65_RS00320 only