Conservation of cofitness between CSW01_17605 and CSW01_19400 in Vibrio cholerae E7946 ATCC 55056

22 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_17605 DNA-binding response regulator 1.0 CSW01_19400 putrescine-ornithine antiporter 0.51 4
Escherichia coli ECRC101 0.55 MCAODC_27935 citB DNA-binding response regulator 0.76 MCAODC_26310 potE putrescine-ornithine antiporter low > 87
Escherichia coli ECRC99 0.55 KEDOAH_19265 citB DNA-binding response regulator 0.76 KEDOAH_20875 potE putrescine-ornithine antiporter — —
Escherichia coli ECRC102 0.55 NIAGMN_06760 citB DNA-binding response regulator 0.76 NIAGMN_05150 potE putrescine-ornithine antiporter low > 80
Escherichia coli ECRC100 0.55 OKFHMN_08705 citB DNA-binding response regulator 0.76 OKFHMN_07095 potE putrescine-ornithine antiporter low > 79
Escherichia coli ECRC98 0.55 JDDGAC_12360 citB DNA-binding response regulator 0.76 JDDGAC_10745 potE putrescine-ornithine antiporter low > 87
Enterobacter asburiae PDN3 0.45 EX28DRAFT_3952 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 0.75 EX28DRAFT_2286 putrescine-ornithine antiporter low > 76
Escherichia fergusonii Becca 0.45 EFB2_00029 Transcriptional regulatory protein UhpA 0.76 EFB2_03405 Putrescine transporter PotE low > 86
Escherichia coli ECOR38 0.45 HEPCGN_13905 uhpA_G97D DNA-binding response regulator UhpA 0.76 HEPCGN_01140 potE putrescine-ornithine antiporter low > 88
Escherichia coli BL21 0.45 ECD_03553 response regulator in two-component regulatory system wtih UhpB 0.76 ECD_00648 putrescine/proton symporter: putrescine/ornithine antiporter low > 61
Escherichia coli ECOR27 0.45 NOLOHH_07335 uhpA_G97D DNA-binding response regulator UhpA 0.76 NOLOHH_23475 potE putrescine-ornithine antiporter low > 76
Escherichia coli ECRC62 0.45 BNILDI_04190 uhpA_G97D DNA-binding response regulator UhpA 0.76 BNILDI_21480 potE putrescine-ornithine antiporter low > 75
Escherichia coli Nissle 1917 0.45 ECOLIN_RS21160 transcriptional regulator UhpA 0.76 ECOLIN_RS03735 putrescine-ornithine antiporter low > 55
Escherichia coli BW25113 0.45 b3669 uhpA DNA-binding response regulator in two-component regulatory system wtih UhpB (NCBI) 0.76 b0692 potE putrescine/proton symporter: putrescine/ornithine antiporter (NCBI) low > 76
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.44 GFF304 Transcriptional regulatory protein UhpA 0.77 GFF4603 Putrescine/proton symporter, putrescine/ornithine antiporter PotE low > 78
Enterobacter sp. TBS_079 0.44 MPMX20_00033 Transcriptional regulatory protein UhpA 0.74 MPMX20_01335 Putrescine transporter PotE low > 85
Serratia liquefaciens MT49 0.42 IAI46_00435 transcriptional regulator UhpA 0.76 IAI46_02035 putrescine-ornithine antiporter low > 87
Dyella japonica UNC79MFTsu3.2 0.35 ABZR86_RS05670 response regulator transcription factor 0.17 ABZR86_RS00365 amino acid permease low > 74
Pseudomonas fluorescens GW456-L13 0.35 PfGW456L13_3685 DNA-binding response regulator, LuxR family 0.63 PfGW456L13_3775 Putrescine/proton symporter, putrescine/ornithine antiporter PotE low > 87
Rhodanobacter denitrificans FW104-10B01 0.34 LRK54_RS17955 response regulator transcription factor 0.18 LRK54_RS04530 amino acid permease low > 59
Rhodanobacter denitrificans MT42 0.34 LRK55_RS17810 response regulator transcription factor 0.18 LRK55_RS04305 amino acid permease low > 63
Rhodanobacter sp. FW510-T8 0.33 OKGIIK_07345 citB DNA-binding response regulator 0.17 OKGIIK_11355 Amino acid permease low > 53
Sinorhizobium meliloti 1021 0.26 SM_b20468 sensory transduction DNA-binding response regulator protein 0.55 SMa0678 putrescine transporter low > 103

Not shown: 16 genomes with orthologs for CSW01_17605 only; 16 genomes with orthologs for CSW01_19400 only