Conservation of cofitness between CSW01_06405 and CSW01_14325 in Vibrio cholerae E7946 ATCC 55056

27 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_06405 murein L,D-transpeptidase 1.0 CSW01_14325 peptidase 0.51 5
Pantoea agglomerans CFBP13505 P0401 0.26 PagCFBP13505_RS04550 L,D-transpeptidase 0.43 PagCFBP13505_RS17740 L,D-transpeptidase low > 74
Dickeya dianthicola ME23 0.26 DZA65_RS13465 L,D-transpeptidase 0.42 DZA65_RS13280 L,D-transpeptidase family protein 0.42 42
Enterobacter asburiae PDN3 0.26 EX28DRAFT_2011 Uncharacterized protein conserved in bacteria 0.44 EX28DRAFT_1817 Uncharacterized protein conserved in bacteria low > 76
Dickeya dianthicola 67-19 0.26 HGI48_RS13005 L,D-transpeptidase 0.42 HGI48_RS12815 L,D-transpeptidase family protein low > 71
Enterobacter sp. TBS_079 0.26 MPMX20_01583 putative L,D-transpeptidase YcbB 0.45 MPMX20_01794 putative L,D-transpeptidase YcfS low > 85
Dickeya dadantii 3937 0.25 DDA3937_RS12930 L,D-transpeptidase 0.42 DDA3937_RS12750 L,D-transpeptidase family protein low > 74
Klebsiella pneumoniae MKP103 0.25 KDGMDA_18050 L D-transpeptidase 0.42 KDGMDA_24140 murein L D-transpeptidase low > 95
Pectobacterium carotovorum WPP14 0.25 HER17_RS12045 L,D-transpeptidase 0.43 HER17_RS08950 L,D-transpeptidase family protein low > 75
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.25 GFF3682 L,D-transpeptidase YcbB 0.46 GFF3396 L,D-transpeptidase YcfS low > 78
Pantoea sp. MT58 0.25 IAI47_12780 L,D-transpeptidase 0.43 IAI47_10850 L,D-transpeptidase family protein low > 76
Klebsiella michiganensis M5al 0.25 BWI76_RS09850 L,D-transpeptidase 0.45 BWI76_RS11200 transpeptidase low > 92
Escherichia coli ECOR27 0.25 NOLOHH_21960 ldtD L,D-transpeptidase 0.44 NOLOHH_21000 ldtC L,D-transpeptidase LdtC low > 76
Escherichia coli ECRC62 0.24 BNILDI_20215 ldtD L,D-transpeptidase 0.44 BNILDI_19165 ldtC L,D-transpeptidase LdtC low > 75
Escherichia coli BL21 0.24 ECD_00929 murein L,D-transpeptidase 0.44 ECD_01109 L,D-transpeptidase linking Lpp to murein low > 61
Escherichia coli Nissle 1917 0.24 ECOLIN_RS04895 L,D-transpeptidase 0.44 ECOLIN_RS06420 L,D-transpeptidase LdtC low > 55
Escherichia coli HS(pFamp)R (ATCC 700891) 0.24 OHPLBJKB_02742 hypothetical protein 0.44 OHPLBJKB_02553 putative L,D-transpeptidase YcfS low > 74
Escherichia coli BW25113 0.24 b0925 ycbB predicted carboxypeptidase (NCBI) 0.44 b1113 ycfS hypothetical protein (NCBI) low > 76
Escherichia fergusonii Becca 0.24 EFB2_03139 putative L,D-transpeptidase YcbB 0.44 EFB2_02862 putative L,D-transpeptidase YcfS low > 86
Escherichia coli ECOR38 0.24 HEPCGN_23125 ldtD L,D-transpeptidase 0.44 HEPCGN_24010 ldtC L,D-transpeptidase LdtC 0.36 47
Escherichia coli ECRC101 0.24 MCAODC_24790 ldtD L,D-transpeptidase 0.44 MCAODC_22835 ldtC L,D-transpeptidase LdtC low > 87
Escherichia coli ECRC100 0.24 OKFHMN_05400 ldtD L,D-transpeptidase 0.44 OKFHMN_03475 ldtC L,D-transpeptidase LdtC low > 79
Escherichia coli ECRC98 0.24 JDDGAC_09010 ldtD L,D-transpeptidase 0.44 JDDGAC_07135 ldtC L,D-transpeptidase LdtC low > 87
Escherichia coli ECRC99 0.24 KEDOAH_22335 ldtD L,D-transpeptidase 0.44 KEDOAH_24280 ldtC L,D-transpeptidase LdtC — —
Escherichia coli ECRC102 0.24 NIAGMN_03120 ldtD L,D-transpeptidase 0.44 NIAGMN_24355 ldtC L,D-transpeptidase LdtC low > 80
Pseudomonas fluorescens FW300-N2E2 0.16 Pf6N2E2_1111 cell wall degradation protein 0.36 Pf6N2E2_2474 ErfK/YbiS/YcfS/YnhG family protein low > 103
Pseudomonas fluorescens FW300-N2C3 0.16 AO356_26185 peptidoglycan-binding protein 0.36 AO356_03215 hypothetical protein low > 104
Pseudomonas lactucae CFBP13502 0.16 GEMAOFIL_03475 putative L,D-transpeptidase YcbB 0.35 GEMAOFIL_01816 hypothetical protein low > 96

Not shown: 5 genomes with orthologs for CSW01_06405 only; 27 genomes with orthologs for CSW01_14325 only