Conservation of cofitness between CSW01_03330 and CSW01_13625 in Vibrio cholerae E7946 ATCC 55056

30 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_03330 transcription elongation factor GreA 1.0 CSW01_13625 C4-dicarboxylate ABC transporter 0.46 20
Escherichia coli Nissle 1917 0.68 ECOLIN_RS18320 transcription elongation factor GreA 0.54 ECOLIN_RS24040 anaerobic C4-dicarboxylate transporter DcuA — —
Escherichia coli BL21 0.68 ECD_03046 transcript cleavage factor 0.54 ECD_04008 C4-dicarboxylate antiporter low > 61
Escherichia coli ECOR38 0.68 HEPCGN_16920 greA transcription elongation factor GreA 0.54 HEPCGN_10665 dcuA anaerobic C4-dicarboxylate transporter DcuA low > 88
Escherichia coli ECRC100 0.68 OKFHMN_18045 greA transcription elongation factor GreA 0.54 OKFHMN_12440 dcuA anaerobic C4-dicarboxylate transporter DcuA low > 79
Escherichia coli ECOR27 0.68 NOLOHH_09845 greA transcription elongation factor GreA 0.54 NOLOHH_04705 dcuA anaerobic C4-dicarboxylate transporter DcuA low > 75
Escherichia coli ECRC101 0.68 MCAODC_08565 greA transcription elongation factor GreA 0.54 MCAODC_02950 dcuA anaerobic C4-dicarboxylate transporter DcuA low > 87
Escherichia coli ECRC99 0.68 KEDOAH_10105 greA transcription elongation factor GreA 0.54 KEDOAH_15725 dcuA anaerobic C4-dicarboxylate transporter DcuA — —
Escherichia coli BW25113 0.68 b3181 greA transcription elongation factor: cleaves 3' nucleotide of paused mRNA (VIMSS) 0.54 b4138 dcuA C4-dicarboxylate antiporter (NCBI) low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.68 OHPLBJKB_00519 Transcription elongation factor GreA 0.54 OHPLBJKB_03905 Anaerobic C4-dicarboxylate transporter DcuA low > 74
Escherichia coli ECRC62 0.68 BNILDI_01690 greA transcription elongation factor GreA 0.54 BNILDI_06785 dcuA anaerobic C4-dicarboxylate transporter DcuA low > 75
Escherichia coli ECRC98 0.68 JDDGAC_21670 greA transcription elongation factor GreA 0.54 JDDGAC_16075 dcuA anaerobic C4-dicarboxylate transporter DcuA low > 87
Escherichia fergusonii Becca 0.68 EFB2_00642 Transcription elongation factor GreA 0.54 EFB2_04397 Anaerobic C4-dicarboxylate transporter DcuA low > 86
Escherichia coli ECRC102 0.68 NIAGMN_15805 greA transcription elongation factor GreA 0.54 NIAGMN_10285 dcuA anaerobic C4-dicarboxylate transporter DcuA low > 80
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.67 GFF2922 Transcription elongation factor GreA 0.54 GFF2014 C4-dicarboxylate transporter DcuA low > 78
Klebsiella pneumoniae MKP103 0.67 KDGMDA_05975 transcription elongation factor GreA 0.62 KDGMDA_10815 C4-dicarboxylate ABC transporter low > 94
Klebsiella pneumoniae MRSN742743 0.67 KFA93_RS13230 greA;go_function=DNA transcription elongation factor GreA 0.62 KFA93_RS21280 anaerobic C4-dicarboxylate transporter low > 82
Enterobacter sp. TBS_079 0.66 MPMX20_04085 Transcription elongation factor GreA 0.62 MPMX20_00418 Anaerobic C4-dicarboxylate transporter DcuA low > 85
Enterobacter asburiae PDN3 0.66 EX28DRAFT_3232 transcription elongation factor GreA 0.62 EX28DRAFT_3335 anaerobic c4-dicarboxylate membrane transporter family protein low > 76
Klebsiella michiganensis M5al 0.66 BWI76_RS25160 transcription elongation factor GreA 0.62 BWI76_RS02325 anaerobic C4-dicarboxylate transporter low > 92
Dickeya dadantii 3937 0.66 DDA3937_RS03015 transcription elongation factor GreA 0.60 DDA3937_RS02715 anaerobic C4-dicarboxylate transporter — —
Pectobacterium carotovorum WPP14 0.65 HER17_RS18330 transcription elongation factor GreA 0.59 HER17_RS18840 anaerobic C4-dicarboxylate transporter — —
Dickeya dianthicola 67-19 0.65 HGI48_RS03185 transcription elongation factor GreA 0.60 HGI48_RS02690 anaerobic C4-dicarboxylate transporter low > 71
Dickeya dianthicola ME23 0.65 DZA65_RS03180 transcription elongation factor GreA 0.60 DZA65_RS02845 anaerobic C4-dicarboxylate transporter low > 75
Rahnella sp. WP5 0.64 EX31_RS08595 transcription elongation factor GreA 0.52 EX31_RS08970 anaerobic C4-dicarboxylate transporter low > 89
Pantoea sp. MT58 0.64 IAI47_17080 transcription elongation factor GreA 0.60 IAI47_17325 anaerobic C4-dicarboxylate transporter low > 76
Pantoea agglomerans CFBP13505 P0401 0.64 PagCFBP13516_RS17300 greA transcription elongation factor GreA 0.60 PagCFBP13516_RS17620 anaerobic C4-dicarboxylate transporter low > 80
Erwinia amylovora T8 0.63 OLJFJH_07185 transcription elongation factor GreA 0.58 OLJFJH_02620 C4-dicarboxylate ABC transporter low > 58
Serratia liquefaciens MT49 0.63 IAI46_01880 transcription elongation factor GreA 0.54 IAI46_01475 anaerobic C4-dicarboxylate transporter low > 87
Erwinia tracheiphila HP pepo 2.2 0.58 IJEDHG_13865 greA transcription elongation factor GreA 0.60 IJEDHG_07060 C4-dicarboxylate ABC transporter low > 61
Erwinia tracheiphila SCR3 0.58 LU632_RS21165 greA transcription elongation factor GreA 0.60 LU632_RS01845 anaerobic C4-dicarboxylate transporter low > 73

Not shown: 85 genomes with orthologs for CSW01_03330 only; 0 genomes with orthologs for CSW01_13625 only