Conservation of cofitness between CSW01_05895 and CSW01_11920 in Vibrio cholerae E7946 ATCC 55056

21 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_05895 tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB 1.0 CSW01_11920 NupC/NupG family nucleoside CNT transporter 0.59 10
Klebsiella michiganensis M5al 0.67 BWI76_RS18195 tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB 0.69 BWI76_RS04125 NupC/NupG family nucleoside CNT transporter low > 92
Serratia liquefaciens MT49 0.66 IAI46_14675 tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB 0.69 IAI46_02905 NupC/NupG family nucleoside CNT transporter low > 86
Escherichia coli ECRC62 0.66 BNILDI_15455 cmoB tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB 0.47 BNILDI_13970 nupX Putative nucleoside permease NupX low > 75
Escherichia coli ECRC99 0.66 KEDOAH_01885 cmoB tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB 0.47 KEDOAH_04710 nupX Putative nucleoside permease NupX — —
Escherichia coli ECOR38 0.66 HEPCGN_04630 cmoB tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB 0.47 HEPCGN_22740 nupX Putative nucleoside permease NupX low > 87
Escherichia coli ECRC101 0.66 MCAODC_19185 cmoB tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB 0.47 MCAODC_14525 nupX Putative nucleoside permease NupX low > 87
Escherichia coli HS(pFamp)R (ATCC 700891) 0.66 OHPLBJKB_01857 tRNA U34 carboxymethyltransferase 0.47 OHPLBJKB_01550 Putative nucleoside permease NupX low > 73
Escherichia coli ECRC102 0.66 NIAGMN_01840 cmoB tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB 0.47 NIAGMN_21240 nupX Putative nucleoside permease NupX — —
Escherichia coli BL21 0.66 ECD_01842 tRNA (cmo5U34)-carboxymethyltransferase, carboxy-SAM-dependent 0.46 ECD_02090 nucleoside permease low > 61
Escherichia coli ECRC98 0.66 JDDGAC_00795 cmoB tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB 0.47 JDDGAC_27435 nupX Putative nucleoside permease NupX low > 86
Escherichia coli ECRC100 0.66 OKFHMN_26220 cmoB tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB 0.47 OKFHMN_23475 nupX Putative nucleoside permease NupX low > 80
Escherichia coli ECOR27 0.66 NOLOHH_16665 cmoB tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB 0.47 NOLOHH_15035 psuT Putative pseudouridine transporter low > 75
Escherichia coli BW25113 0.66 b1871 yecP predicted S-adenosyl-L-methionine-dependent methyltransferase (NCBI) 0.47 b2161 yeiJ predicted nucleoside transporter (NCBI) low > 76
Escherichia fergusonii Becca 0.66 EFB2_02071 tRNA U34 carboxymethyltransferase 0.47 EFB2_01693 Putative pseudouridine transporter low > 86
Escherichia coli Nissle 1917 0.66 ECOLIN_RS10700 tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB 0.47 ECOLIN_RS12660 NupC/NupG family nucleoside CNT transporter — —
Pectobacterium carotovorum WPP14 0.65 HER17_RS11890 tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB 0.67 HER17_RS19040 NupC/NupG family nucleoside CNT transporter low > 75
Shewanella loihica PV-4 0.64 Shew_2082 putative methyltransferase (RefSeq) 0.66 Shew_2817 nucleoside transporter (RefSeq) — —
Shewanella oneidensis MR-1 0.64 SO2436 methyltransferase, putative (NCBI ptt file) 0.65 SO1214 NupC family protein (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.63 Shewana3_1950 putative methyltransferase (RefSeq) 0.65 Shewana3_1039 nucleoside permease (cytidine, inosine, uridine, or thymidine) (from data) low > 73
Shewanella amazonensis SB2B 0.63 Sama_1846 methyltransferase, putative (RefSeq) 0.66 Sama_0971 nucleoside transporter (RefSeq) low > 62
Alteromonas macleodii MIT1002 0.59 MIT1002_02226 tRNA (mo5U34)-methyltransferase 0.57 MIT1002_03499 Nucleoside permease NupX low > 70

Not shown: 25 genomes with orthologs for CSW01_05895 only; 3 genomes with orthologs for CSW01_11920 only