Conservation of cofitness between CSW01_04555 and CSW01_11525 in Vibrio cholerae E7946 ATCC 55056

29 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_04555 tRNA pseudouridine(65) synthase TruC 1.0 CSW01_11525 hypothetical protein 0.42 15
Pantoea sp. MT58 0.67 IAI47_04065 tRNA pseudouridine(65) synthase TruC 0.60 IAI47_15550 DUF3461 family protein low > 76
Pantoea agglomerans CFBP13505 P0401 0.67 PagCFBP13505_RS16905 tRNA pseudouridine(65) synthase TruC 0.60 PagCFBP13505_RS13455 DUF3461 family protein low > 74
Klebsiella michiganensis M5al 0.66 BWI76_RS22850 tRNA pseudouridine synthase TruC 0.59 BWI76_RS05190 hypothetical protein low > 92
Serratia liquefaciens MT49 0.66 IAI46_20290 tRNA pseudouridine(65) synthase TruC 0.61 IAI46_20280 DUF3461 family protein low > 86
Escherichia coli ECRC62 0.65 BNILDI_10595 truC tRNA pseudouridine(65) synthase TruC 0.60 BNILDI_09080 yaeH DUF3461 domain-containing protein low > 75
Enterobacter asburiae PDN3 0.65 EX28DRAFT_2872 Pseudouridylate synthases, 23S RNA-specific 0.59 EX28DRAFT_3752 Protein of unknown function (DUF3461) — —
Escherichia coli ECOR27 0.65 NOLOHH_12090 truC tRNA pseudouridine(65) synthase TruC 0.60 NOLOHH_02590 yaeH DUF3461 domain-containing protein low > 76
Escherichia coli BW25113 0.65 b2791 yqcB tRNA pseudouridine synthase (NCBI) 0.60 b0163 yaeH hypothetical protein (NCBI) low > 76
Escherichia coli Nissle 1917 0.65 ECOLIN_RS15550 tRNA pseudouridine(65) synthase TruC 0.60 ECOLIN_RS00905 DUF3461 family protein — —
Escherichia coli BL21 0.65 ECD_02636 tRNA(Ile1,Asp) pseudouridine(65) synthase 0.60 ECD_00162 UPF0325 family protein low > 61
Erwinia amylovora T8 0.65 OLJFJH_09220 tRNA pseudouridine(65) synthase TruC 0.63 OLJFJH_00655 DUF3461 domain-containing protein low > 58
Escherichia coli ECRC99 0.65 KEDOAH_07920 truC tRNA pseudouridine(65) synthase TruC 0.60 KEDOAH_17910 yaeH DUF3461 domain-containing protein — —
Escherichia coli ECRC101 0.65 MCAODC_10735 truC tRNA pseudouridine(65) synthase TruC 0.60 MCAODC_00760 yaeH DUF3461 domain-containing protein low > 88
Escherichia coli HS(pFamp)R (ATCC 700891) 0.65 OHPLBJKB_00940 tRNA pseudouridine synthase C 0.60 OHPLBJKB_03499 hypothetical protein low > 74
Escherichia coli ECRC102 0.65 NIAGMN_17980 truC tRNA pseudouridine(65) synthase TruC 0.60 NIAGMN_08095 yaeH DUF3461 domain-containing protein low > 80
Escherichia coli ECRC98 0.65 JDDGAC_23875 truC tRNA pseudouridine(65) synthase TruC 0.60 JDDGAC_13840 yaeH DUF3461 domain-containing protein low > 87
Escherichia coli ECRC100 0.65 OKFHMN_20210 truC tRNA pseudouridine(65) synthase TruC 0.60 OKFHMN_10245 yaeH DUF3461 domain-containing protein low > 79
Klebsiella pneumoniae MKP103 0.65 KDGMDA_03375 tRNA pseudouridine(65) synthase TruC 0.60 KDGMDA_13435 DUF3461 domain-containing protein low > 95
Escherichia fergusonii Becca 0.65 EFB2_01126 tRNA pseudouridine synthase C 0.60 EFB2_03880 hypothetical protein low > 86
Escherichia coli ECOR38 0.65 HEPCGN_19465 truC tRNA pseudouridine(65) synthase TruC 0.60 HEPCGN_08195 yaeH DUF3461 domain-containing protein low > 88
Dickeya dadantii 3937 0.64 DDA3937_RS05085 tRNA pseudouridine(65) synthase TruC 0.60 DDA3937_RS05095 DUF3461 family protein — —
Dickeya dianthicola 67-19 0.64 HGI48_RS05085 tRNA pseudouridine(65) synthase TruC 0.59 HGI48_RS05095 DUF3461 family protein low > 71
Dickeya dianthicola ME23 0.64 DZA65_RS05425 tRNA pseudouridine(65) synthase TruC 0.59 DZA65_RS05435 DUF3461 family protein low > 75
Enterobacter sp. TBS_079 0.64 MPMX20_03661 tRNA pseudouridine synthase C 0.59 MPMX20_00849 hypothetical protein low > 85
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.64 GFF4846 tRNA pseudouridine synthase C (EC 4.2.1.70) 0.60 GFF58 UPF0325 protein YaeH low > 78
Rahnella sp. WP5 0.63 EX31_RS13065 tRNA pseudouridine(65) synthase TruC 0.61 EX31_RS13055 DUF3461 family protein low > 89
Pectobacterium carotovorum WPP14 0.63 HER17_RS16365 tRNA pseudouridine(65) synthase TruC 0.62 HER17_RS16355 DUF3461 family protein low > 75
Erwinia tracheiphila SCR3 0.63 LU632_RS06295 truC tRNA pseudouridine(65) synthase TruC 0.59 LU632_RS19990 DUF3461 family protein low > 74
Erwinia tracheiphila HP pepo 2.2 0.63 IJEDHG_17320 truC tRNA pseudouridine(65) synthase TruC 0.59 IJEDHG_15155 DUF3461 domain-containing protein low > 61

Not shown: 21 genomes with orthologs for CSW01_04555 only; 0 genomes with orthologs for CSW01_11525 only