Conservation of cofitness between CSW01_02230 and CSW01_10020 in Vibrio cholerae E7946 ATCC 55056

29 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_02230 ribonuclease E inhibitor RraB 1.0 CSW01_10020 ROK family protein 0.76 8
Erwinia tracheiphila SCR3 0.55 LU632_RS20905 rraB ribonuclease E inhibitor RraB 0.47 LU632_RS12305 ROK family transcriptional regulator low > 74
Erwinia tracheiphila HP pepo 2.2 0.55 IJEDHG_14130 rraB ribonuclease E inhibitor RraB 0.47 IJEDHG_23280 transcriptional regulator low > 61
Erwinia amylovora T8 0.54 OLJFJH_07340 ribonuclease E inhibitor RraB 0.48 OLJFJH_14275 transcriptional regulator low > 58
Escherichia coli BW25113 0.53 b4255 yjgD hypothetical protein (NCBI) 0.46 b1594 dgsA DNA-binding transcriptional repressor (NCBI) low > 76
Escherichia coli ECRC100 0.53 OKFHMN_11830 rraB ribonuclease E inhibitor RraB 0.47 OKFHMN_27740 mlc DNA-binding transcriptional repressor Mlc low > 79
Escherichia coli ECRC102 0.53 NIAGMN_09680 rraB ribonuclease E inhibitor RraB 0.47 NIAGMN_00335 mlc DNA-binding transcriptional repressor Mlc low > 80
Escherichia coli ECRC98 0.53 JDDGAC_15470 rraB ribonuclease E inhibitor RraB 0.47 JDDGAC_02330 mlc DNA-binding transcriptional repressor Mlc low > 87
Escherichia coli ECRC62 0.53 BNILDI_07430 rraB ribonuclease E inhibitor RraB 0.47 BNILDI_17035 mlc DNA-binding transcriptional repressor Mlc low > 75
Escherichia coli ECOR27 0.53 NOLOHH_04085 rraB ribonuclease E inhibitor RraB 0.47 NOLOHH_18245 mlc DNA-binding transcriptional repressor Mlc low > 76
Escherichia coli ECRC99 0.53 KEDOAH_16325 rraB ribonuclease E inhibitor RraB 0.47 KEDOAH_00365 mlc DNA-binding transcriptional repressor Mlc — —
Escherichia coli BL21 0.53 ECD_04121 protein inhibitor of RNase E 0.46 ECD_01563 glucosamine anaerobic growth regulon transcriptional repressor; autorepressor — —
Escherichia coli ECRC101 0.53 MCAODC_02335 rraB ribonuclease E inhibitor RraB 0.47 MCAODC_17670 mlc DNA-binding transcriptional repressor Mlc low > 88
Escherichia coli HS(pFamp)R (ATCC 700891) 0.53 OHPLBJKB_03781 Regulator of ribonuclease activity B 0.46 OHPLBJKB_02132 Protein mlc low > 74
Escherichia coli ECOR38 0.53 HEPCGN_10020 rraB ribonuclease E inhibitor RraB 0.47 HEPCGN_06115 mlc DNA-binding transcriptional repressor Mlc low > 88
Escherichia coli Nissle 1917 0.52 ECOLIN_RS24670 ribonuclease E inhibitor RraB 0.47 ECOLIN_RS08905 sugar metabolism global transcriptional regulator Mlc — —
Escherichia fergusonii Becca 0.52 EFB2_04280 Regulator of ribonuclease activity B 0.47 EFB2_02398 Protein mlc low > 86
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.50 GFF941 Ribonuclease E inhibitor RraB 0.47 GFF1785 Mlc, transcriptional repressor of MalT (the transcriptional activator of maltose regulon) and manXYZ operon low > 78
Klebsiella michiganensis M5al 0.50 BWI76_RS03015 RNase E inhibitor protein 0.47 BWI76_RS15955 transcriptional regulator low > 92
Pantoea sp. MT58 0.50 IAI47_16825 ribonuclease E inhibitor RraB 0.45 IAI47_09750 ROK family transcriptional regulator low > 76
Pantoea agglomerans CFBP13505 P0401 0.50 PagCFBP13505_RS08945 ribonuclease E inhibitor RraB 0.45 PagCFBP13505_RS06405 ROK family transcriptional regulator low > 74
Klebsiella pneumoniae MKP103 0.48 KDGMDA_11505 ribonuclease E inhibitor RraB 0.48 KDGMDA_21230 transcriptional regulator low > 95
Enterobacter sp. TBS_079 0.48 MPMX20_00557 Regulator of ribonuclease activity B 0.47 MPMX20_02063 Protein mlc low > 85
Rahnella sp. WP5 0.48 EX31_RS12830 ribonuclease E inhibitor RraB 0.50 EX31_RS16985 ROK family transcriptional regulator low > 89
Enterobacter asburiae PDN3 0.48 EX28DRAFT_3462 Uncharacterized protein conserved in bacteria 0.48 EX28DRAFT_1493 Transcriptional regulator/sugar kinase low > 76
Serratia liquefaciens MT49 0.47 IAI46_02325 ribonuclease E inhibitor RraB 0.50 IAI46_11685 ROK family transcriptional regulator low > 86
Pectobacterium carotovorum WPP14 0.47 HER17_RS19495 ribonuclease E inhibitor RraB 0.50 HER17_RS10735 ROK family transcriptional regulator low > 75
Dickeya dianthicola 67-19 0.47 HGI48_RS01920 ribonuclease E inhibitor RraB 0.49 HGI48_RS10675 ROK family transcriptional regulator low > 71
Dickeya dianthicola ME23 0.47 DZA65_RS01990 ribonuclease E inhibitor RraB 0.49 DZA65_RS11145 ROK family transcriptional regulator low > 75
Dickeya dadantii 3937 0.47 DDA3937_RS01945 ribonuclease E inhibitor RraB 0.50 DDA3937_RS10675 ROK family transcriptional regulator low > 74

Not shown: 4 genomes with orthologs for CSW01_02230 only; 16 genomes with orthologs for CSW01_10020 only