Conservation of cofitness between CSW01_04550 and CSW01_09930 in Vibrio cholerae E7946 ATCC 55056

25 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_04550 pseudouridine synthase 1.0 CSW01_09930 ATP-dependent DNA helicase 0.51 1
Shewanella loihica PV-4 0.38 Shew_2644 hypothetical protein (RefSeq) 0.40 Shew_2196 helicase c2 (RefSeq) low > 60
Pectobacterium carotovorum WPP14 0.37 HER17_RS16370 YqcC family protein 0.63 HER17_RS11290 ATP-dependent DNA helicase low > 75
Serratia liquefaciens MT49 0.36 IAI46_20305 YqcC family protein 0.64 IAI46_14550 ATP-dependent DNA helicase low > 87
Erwinia tracheiphila HP pepo 2.2 0.35 IJEDHG_17315 tRNA pseudouridine synthase C 0.62 IJEDHG_22440 ATP-dependent helicase low > 61
Erwinia tracheiphila SCR3 0.35 LU632_RS06290 YqcC family protein 0.61 LU632_RS13150 ATP-dependent DNA helicase low > 73
Rahnella sp. WP5 0.35 EX31_RS13070 YqcC family protein 0.64 EX31_RS10615 ATP-dependent DNA helicase 0.47 27
Erwinia amylovora T8 0.33 OLJFJH_09215 tRNA pseudouridine synthase C 0.63 OLJFJH_13085 ATP-dependent helicase low > 58
Enterobacter asburiae PDN3 0.32 EX28DRAFT_2873 Uncharacterized protein conserved in bacteria 0.63 EX28DRAFT_0750 Rad3-related DNA helicases low > 76
Kangiella aquimarina DSM 16071 0.32 B158DRAFT_1935 Uncharacterized protein conserved in bacteria 0.42 B158DRAFT_2492 Rad3-related DNA helicases low > 40
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.29 GFF4847 Hypothetical protein YqcC (clustered with tRNA pseudouridine synthase C) 0.63 GFF2823 DinG family ATP-dependent helicase YoaA low > 78
Shewanella oneidensis MR-1 0.29 SO1619 conserved hypothetical protein (NCBI ptt file) 0.43 SO2081 ATP-dependent helicase, DinG family (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.29 Shewana3_2825 dTDP-4-dehydrorhamnose 3,5-epimerase (RefSeq) 0.43 Shewana3_1859 helicase c2 (RefSeq) low > 73
Escherichia coli HS(pFamp)R (ATCC 700891) 0.27 OHPLBJKB_00939 putative protein YqcC 0.63 OHPLBJKB_01925 putative ATP-dependent helicase DinG low > 74
Escherichia coli BL21 0.27 ECD_02637 DUF446 family protein 0.63 ECD_01778 putative ATP-dependent helicase, DinG family — —
Escherichia coli ECOR38 0.27 HEPCGN_19460 tRNA pseudouridine synthase C 0.63 HEPCGN_04970 yoaA putative ATP-dependent DNA helicase YoaA low > 88
Escherichia coli ECRC99 0.26 KEDOAH_07925 tRNA pseudouridine synthase C 0.63 KEDOAH_01530 yoaA putative ATP-dependent DNA helicase YoaA — —
Escherichia coli ECRC100 0.26 OKFHMN_20205 tRNA pseudouridine synthase C 0.63 OKFHMN_26580 yoaA putative ATP-dependent DNA helicase YoaA low > 79
Escherichia coli ECRC101 0.26 MCAODC_10730 tRNA pseudouridine synthase C 0.63 MCAODC_18830 yoaA putative ATP-dependent DNA helicase YoaA low > 87
Escherichia coli ECRC98 0.26 JDDGAC_23870 tRNA pseudouridine synthase C 0.63 JDDGAC_01155 yoaA putative ATP-dependent DNA helicase YoaA low > 87
Escherichia coli ECRC102 0.26 NIAGMN_17975 tRNA pseudouridine synthase C 0.63 NIAGMN_01485 yoaA putative ATP-dependent DNA helicase YoaA 0.75 6
Escherichia fergusonii Becca 0.26 EFB2_01125 putative protein YqcC 0.63 EFB2_02192 putative ATP-dependent DNA helicase YoaA low > 86
Escherichia coli Nissle 1917 0.26 ECOLIN_RS15555 YqcC family protein 0.63 ECOLIN_RS10055 ATP-dependent DNA helicase — —
Escherichia coli BW25113 0.25 b2792 yqcC hypothetical protein (NCBI) 0.63 b1808 yoaA conserved protein with nucleoside triphosphate hydrolase domain (NCBI) low > 76
Escherichia coli ECRC62 0.25 BNILDI_10590 yqcC Uncharacterized protein YqcC 0.63 BNILDI_15885 yoaA putative ATP-dependent DNA helicase YoaA low > 75
Escherichia coli ECOR27 0.25 NOLOHH_12085 yqcC Uncharacterized protein YqcC 0.63 NOLOHH_17100 yoaA putative ATP-dependent DNA helicase YoaA low > 76

Not shown: 4 genomes with orthologs for CSW01_04550 only; 39 genomes with orthologs for CSW01_09930 only