Conservation of cofitness between CSW01_01030 and CSW01_08465 in Vibrio cholerae E7946 ATCC 55056

20 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_01030 AraC family transcriptional regulator 1.0 CSW01_08465 ABC transporter ATP-binding protein 0.63 3
Shewanella oneidensis MR-1 0.31 SO0766 transcriptional regulator, AraC/XylS family (NCBI ptt file) 0.51 SO1801 sapF peptide ABC transporter, ATP-binding protein (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.31 Shewana3_3537 AraC family transcriptional regulator (RefSeq) 0.52 Shewana3_2654 ABC transporter related (RefSeq) low > 73
Shewanella loihica PV-4 0.29 Shew_1463 AraC family transcriptional regulator (RefSeq) 0.53 Shew_2502 ABC transporter-related protein (RefSeq) low > 60
Shewanella amazonensis SB2B 0.26 Sama_1551 AraC/XylS family transcriptional regulator (RefSeq) 0.51 Sama_1231 peptide ABC transporter, ATP-binding protein (RefSeq) low > 62
Erwinia tracheiphila SCR3 0.13 LU632_RS11690 rhaS HTH-type transcriptional activator RhaS 0.55 LU632_RS12610 sapF peptide ABC transporter ATP-binding protein SapF low > 73
Escherichia coli ECRC62 0.13 BNILDI_05505 rhaS HTH-type transcriptional activator RhaS 0.59 BNILDI_18315 sapF peptide ABC transporter ATP-binding protein SapF 0.47 71
Escherichia coli BW25113 0.13 b3905 rhaS DNA-binding transcriptional activator, L-rhamnose-binding (NCBI) 0.59 b1290 sapF predicted antimicrobial peptide transporter subunit (NCBI) low > 76
Erwinia tracheiphila HP pepo 2.2 0.13 IJEDHG_22880 rhaS HTH-type transcriptional activator RhaS 0.55 IJEDHG_23660 sapF peptide ABC transporter ATP-binding protein SapF low > 61
Escherichia coli ECOR27 0.13 NOLOHH_06020 rhaS HTH-type transcriptional activator RhaS 0.59 NOLOHH_20165 sapF peptide ABC transporter ATP-binding protein SapF — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.13 OHPLBJKB_04145 HTH-type transcriptional activator RhaS 0.59 OHPLBJKB_02392 Putrescine export system ATP-binding protein SapF — —
Escherichia coli ECRC102 0.13 NIAGMN_11645 rhaS HTH-type transcriptional activator RhaS 0.59 NIAGMN_26650 sapF peptide ABC transporter ATP-binding protein SapF — —
Escherichia coli ECRC98 0.13 JDDGAC_17515 rhaS HTH-type transcriptional activator RhaS 0.59 JDDGAC_05025 sapF peptide ABC transporter ATP-binding protein SapF — —
Escherichia coli BL21 0.13 ECD_03791 transcriptional activator of rhaBAD and rhaT 0.59 ECD_01267 antimicrobial peptide ABC transporter ATPase — —
Escherichia coli ECRC99 0.13 KEDOAH_14265 rhaS HTH-type transcriptional activator RhaS 0.59 KEDOAH_26295 sapF peptide ABC transporter ATP-binding protein SapF — —
Escherichia coli ECRC100 0.13 OKFHMN_13890 rhaS HTH-type transcriptional activator RhaS 0.59 OKFHMN_02480 sapF peptide ABC transporter ATP-binding protein SapF — —
Escherichia coli ECRC101 0.13 MCAODC_04390 rhaS HTH-type transcriptional activator RhaS 0.59 MCAODC_15790 sapF peptide ABC transporter ATP-binding protein SapF — —
Escherichia fergusonii Becca 0.13 EFB2_04712 HTH-type transcriptional activator RhaS 0.59 EFB2_02630 Putrescine export system ATP-binding protein SapF — —
Escherichia coli Nissle 1917 0.12 ECOLIN_RS22500 HTH-type transcriptional activator RhaS 0.59 ECOLIN_RS07805 peptide ABC transporter ATP-binding protein SapF — —
Escherichia coli ECOR38 0.12 HEPCGN_12530 rhaS HTH-type transcriptional activator RhaS 0.59 HEPCGN_25720 sapF peptide ABC transporter ATP-binding protein SapF low > 88
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.11 GFF2266 L-rhamnose operon regulatory protein RhaS 0.59 GFF2692 Peptide transport system ATP-binding protein SapF low > 78

Not shown: 16 genomes with orthologs for CSW01_01030 only; 14 genomes with orthologs for CSW01_08465 only