Conservation of cofitness between CSW01_12515 and CSW01_07480 in Vibrio cholerae E7946 ATCC 55056

29 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_12515 DUF1107 domain-containing protein 1.0 CSW01_07480 ribosomal RNA large subunit methyltransferase K/L 0.55 9
Pectobacterium carotovorum WPP14 0.53 HER17_RS03965 DUF1107 domain-containing protein 0.56 HER17_RS11990 bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL low > 75
Serratia liquefaciens MT49 0.52 IAI46_01755 DUF1107 domain-containing protein 0.56 IAI46_08820 bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL low > 86
Dickeya dianthicola 67-19 0.52 HGI48_RS17230 DUF1107 domain-containing protein 0.56 HGI48_RS12910 bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL low > 71
Rahnella sp. WP5 0.52 EX31_RS08710 DUF1107 domain-containing protein 0.55 EX31_RS18080 bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL low > 89
Dickeya dadantii 3937 0.52 DDA3937_RS17175 DUF1107 domain-containing protein 0.56 DDA3937_RS12840 bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL low > 74
Dickeya dianthicola ME23 0.52 DZA65_RS18315 DUF1107 domain-containing protein 0.56 DZA65_RS13375 bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL low > 75
Erwinia amylovora T8 0.52 OLJFJH_02405 DUF1107 domain-containing protein 0.55 OLJFJH_15975 bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL low > 58
Enterobacter sp. TBS_079 0.51 MPMX20_00494 hypothetical protein 0.56 MPMX20_01599 Ribosomal RNA large subunit methyltransferase K/L low > 85
Enterobacter asburiae PDN3 0.51 EX28DRAFT_3403 Protein of unknown function (DUF1107) 0.55 EX28DRAFT_1995 Predicted N6-adenine-specific DNA methylase low > 76
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.51 GFF870 FIG00614015: hypothetical protein 0.56 GFF3239 23S rRNA (guanine-N-2-) -methyltransferase rlmL EC 2.1.1.-) low > 78
Escherichia coli Nissle 1917 0.50 ECOLIN_RS24490 DUF1107 domain-containing protein 0.57 ECOLIN_RS04980 bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL low > 55
Escherichia coli ECRC102 0.50 NIAGMN_09870 ytfK Uncharacterized protein YtfK 0.57 NIAGMN_03000 rlmKL bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL low > 80
Escherichia coli ECOR38 0.50 HEPCGN_10220 ytfK Uncharacterized protein YtfK 0.57 HEPCGN_23240 rlmKL bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL 0.56 20
Escherichia coli ECOR27 0.50 NOLOHH_04285 ytfK Uncharacterized protein YtfK 0.57 NOLOHH_21835 rlmKL bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL low > 76
Escherichia coli ECRC100 0.50 OKFHMN_12020 ytfK Uncharacterized protein YtfK 0.57 OKFHMN_05280 rlmKL bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL low > 79
Escherichia coli ECRC62 0.50 BNILDI_07235 ytfK Uncharacterized protein YtfK 0.57 BNILDI_20000 rlmKL bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL low > 75
Pantoea agglomerans CFBP13505 P0401 0.50 PagCFBP13505_RS11300 DUF1107 domain-containing protein 0.57 PagCFBP13505_RS04640 bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL low > 74
Escherichia coli BL21 0.50 ECD_04088 DUF1107 family protein 0.57 ECD_00952 23S rRNA m(2)G2445 and m(7)G2069 methyltransferases, SAM-dependent low > 61
Escherichia coli ECRC98 0.50 JDDGAC_15660 ytfK Uncharacterized protein YtfK 0.57 JDDGAC_08890 rlmKL bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL low > 87
Escherichia fergusonii Becca 0.50 EFB2_04312 hypothetical protein 0.57 EFB2_03123 Ribosomal RNA large subunit methyltransferase K/L 0.34 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.50 OHPLBJKB_03817 hypothetical protein 0.57 OHPLBJKB_02718 Ribosomal RNA large subunit methyltransferase K/L low > 74
Escherichia coli BW25113 0.50 b4217 ytfK orf, hypothetical protein (VIMSS) 0.57 b0948 ycbY predicted methyltransferase (NCBI) low > 76
Pantoea sp. MT58 0.50 IAI47_02705 DUF1107 domain-containing protein 0.57 IAI47_12690 bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL low > 76
Escherichia coli ECRC99 0.50 KEDOAH_16135 ytfK Uncharacterized protein YtfK 0.57 KEDOAH_22455 rlmKL bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL — —
Escherichia coli ECRC101 0.50 MCAODC_02535 ytfK Uncharacterized protein YtfK 0.57 MCAODC_24670 rlmKL bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL low > 88
Erwinia tracheiphila SCR3 0.50 LU632_RS02095 DUF1107 domain-containing protein 0.54 LU632_RS09965 rlmKL bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL low > 74
Klebsiella pneumoniae MKP103 0.50 KDGMDA_11230 DUF1107 domain-containing protein 0.55 KDGMDA_18160 bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL low > 95
Erwinia tracheiphila HP pepo 2.2 0.50 IJEDHG_06820 DUF1107 domain-containing protein 0.53 IJEDHG_20480 rlmKL bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL low > 61
Klebsiella michiganensis M5al 0.49 BWI76_RS02745 hypothetical protein 0.55 BWI76_RS09925 23S rRNA (guanine(2445)-N(2))/(guanine(2069)-N(7))- methyltransferase low > 92

Not shown: 0 genomes with orthologs for CSW01_12515 only; 36 genomes with orthologs for CSW01_07480 only