Conservation of cofitness between CSW01_17115 and CSW01_06130 in Vibrio cholerae E7946 ATCC 55056

29 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_17115 SgrR family transcriptional regulator 1.0 CSW01_06130 DNA polymerase II 0.43 14
Pantoea sp. MT58 0.31 IAI47_16025 HTH-type transcriptional regulator SgrR 0.49 IAI47_16050 DNA polymerase II low > 76
Serratia liquefaciens MT49 0.31 IAI46_03320 HTH-type transcriptional regulator SgrR 0.50 IAI46_03280 DNA polymerase II low > 87
Pantoea agglomerans CFBP13505 P0401 0.31 PagCFBP13505_RS12970 HTH-type transcriptional regulator SgrR 0.49 PagCFBP13505_RS12945 DNA polymerase II low > 74
Pectobacterium carotovorum WPP14 0.30 HER17_RS03040 HTH-type transcriptional regulator SgrR 0.48 HER17_RS02995 DNA polymerase II low > 75
Dickeya dianthicola 67-19 0.29 HGI48_RS18095 HTH-type transcriptional regulator SgrR 0.50 HGI48_RS18165 DNA polymerase II low > 71
Dickeya dadantii 3937 0.29 DDA3937_RS18150 HTH-type transcriptional regulator SgrR 0.51 DDA3937_RS18230 DNA polymerase II low > 74
Erwinia tracheiphila HP pepo 2.2 0.29 IJEDHG_06035 sgrR HTH-type transcriptional regulator SgrR 0.51 IJEDHG_06070 polB DNA polymerase II low > 61
Erwinia tracheiphila SCR3 0.29 LU632_RS02840 sgrR HTH-type transcriptional regulator SgrR 0.51 LU632_RS02810 polB DNA polymerase II low > 73
Dickeya dianthicola ME23 0.29 DZA65_RS19245 HTH-type transcriptional regulator SgrR 0.50 DZA65_RS19305 DNA polymerase II low > 75
Erwinia amylovora T8 0.28 OLJFJH_01310 HTH-type transcriptional regulator SgrR 0.50 OLJFJH_01335 DNA polymerase II low > 58
Klebsiella michiganensis M5al 0.28 BWI76_RS04620 transcriptional regulator SgrR 0.49 BWI76_RS04575 DNA polymerase II low > 92
Enterobacter asburiae PDN3 0.28 EX28DRAFT_3661 ABC-type uncharacterized transport system, periplasmic component 0.50 EX28DRAFT_3652 DNA polymerase elongation subunit (family B) low > 76
Klebsiella pneumoniae MKP103 0.28 KDGMDA_12845 HTH-type transcriptional regulator SgrR 0.50 KDGMDA_12800 DNA polymerase II low > 95
Escherichia coli Nissle 1917 0.28 ECOLIN_RS00375 DNA-binding transcriptional regulator SgrR 0.50 ECOLIN_RS00320 DNA polymerase II low > 55
Escherichia coli ECRC62 0.28 BNILDI_08515 sgrR DNA-binding transcriptional regulator SgrR 0.50 BNILDI_08465 polB DNA polymerase II low > 75
Escherichia coli BW25113 0.28 b0069 sgrR DNA-binding transcriptional regulator (NCBI) 0.50 b0060 polB DNA polymerase II (NCBI) low > 76
Escherichia coli ECOR38 0.28 HEPCGN_08725 sgrR DNA-binding transcriptional regulator SgrR 0.50 HEPCGN_08785 polB DNA polymerase II low > 88
Escherichia coli ECOR27 0.28 NOLOHH_03095 sgrR DNA-binding transcriptional regulator SgrR 0.50 NOLOHH_03140 polB DNA polymerase II low > 76
Escherichia fergusonii Becca 0.28 EFB2_03976 HTH-type transcriptional regulator SgrR 0.50 EFB2_03985 DNA polymerase II low > 86
Escherichia coli ECRC99 0.28 KEDOAH_17415 sgrR DNA-binding transcriptional regulator SgrR 0.50 KEDOAH_17360 polB DNA polymerase II — —
Rahnella sp. WP5 0.28 EX31_RS03715 HTH-type transcriptional regulator SgrR 0.51 EX31_RS03740 DNA polymerase II low > 89
Escherichia coli ECRC101 0.28 MCAODC_01255 sgrR DNA-binding transcriptional regulator SgrR 0.50 MCAODC_01310 polB DNA polymerase II low > 87
Escherichia coli ECRC100 0.28 OKFHMN_10740 sgrR DNA-binding transcriptional regulator SgrR 0.50 OKFHMN_10795 polB DNA polymerase II low > 79
Escherichia coli ECRC102 0.28 NIAGMN_08590 sgrR DNA-binding transcriptional regulator SgrR 0.50 NIAGMN_08645 polB DNA polymerase II low > 80
Escherichia coli ECRC98 0.28 JDDGAC_14335 sgrR DNA-binding transcriptional regulator SgrR 0.50 JDDGAC_14390 polB DNA polymerase II low > 87
Escherichia coli BL21 0.28 ECD_00071 transcriptional DNA-binding transcriptional activator of sgrS sRNA 0.50 ECD_00062 DNA polymerase II low > 61
Escherichia coli HS(pFamp)R (ATCC 700891) 0.27 OHPLBJKB_03589 HTH-type transcriptional regulator SgrR 0.50 OHPLBJKB_03598 DNA polymerase II low > 74
Enterobacter sp. TBS_079 0.27 MPMX20_00763 HTH-type transcriptional regulator SgrR 0.49 MPMX20_00754 DNA polymerase II low > 85
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.26 GFF170 SgrR, sugar-phosphate stress, transcriptional activator of SgrS small RNA 0.51 GFF182 DNA polymerase II (EC 2.7.7.7) low > 78

Not shown: 0 genomes with orthologs for CSW01_17115 only; 36 genomes with orthologs for CSW01_06130 only