Conservation of cofitness between CSW01_17115 and CSW01_05965 in Vibrio cholerae E7946 ATCC 55056

29 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_17115 SgrR family transcriptional regulator 1.0 CSW01_05965 threonylcarbamoyl-AMP synthase 0.41 16
Pantoea sp. MT58 0.31 IAI47_16025 HTH-type transcriptional regulator SgrR 0.72 IAI47_09200 threonylcarbamoyl-AMP synthase low > 76
Serratia liquefaciens MT49 0.31 IAI46_03320 HTH-type transcriptional regulator SgrR 0.76 IAI46_14010 threonylcarbamoyl-AMP synthase low > 86
Pantoea agglomerans CFBP13505 P0401 0.31 PagCFBP13505_RS12970 HTH-type transcriptional regulator SgrR 0.72 PagCFBP13505_RS06985 threonylcarbamoyl-AMP synthase low > 74
Pectobacterium carotovorum WPP14 0.30 HER17_RS03040 HTH-type transcriptional regulator SgrR 0.73 HER17_RS10905 threonylcarbamoyl-AMP synthase low > 75
Dickeya dadantii 3937 0.29 DDA3937_RS18150 HTH-type transcriptional regulator SgrR 0.75 DDA3937_RS10495 threonylcarbamoyl-AMP synthase low > 74
Dickeya dianthicola 67-19 0.29 HGI48_RS18095 HTH-type transcriptional regulator SgrR 0.74 HGI48_RS10495 threonylcarbamoyl-AMP synthase low > 71
Erwinia tracheiphila SCR3 0.29 LU632_RS02840 sgrR HTH-type transcriptional regulator SgrR 0.74 LU632_RS12745 threonylcarbamoyl-AMP synthase low > 74
Erwinia tracheiphila HP pepo 2.2 0.29 IJEDHG_06035 sgrR HTH-type transcriptional regulator SgrR 0.74 IJEDHG_23520 L-threonylcarbamoyladenylate synthase low > 61
Dickeya dianthicola ME23 0.29 DZA65_RS19245 HTH-type transcriptional regulator SgrR 0.74 DZA65_RS10975 threonylcarbamoyl-AMP synthase low > 75
Erwinia amylovora T8 0.28 OLJFJH_01310 HTH-type transcriptional regulator SgrR 0.73 OLJFJH_13505 L-threonylcarbamoyladenylate synthase low > 58
Klebsiella michiganensis M5al 0.28 BWI76_RS04620 transcriptional regulator SgrR 0.77 BWI76_RS11870 hypothetical protein low > 92
Enterobacter asburiae PDN3 0.28 EX28DRAFT_3661 ABC-type uncharacterized transport system, periplasmic component 0.76 EX28DRAFT_0939 tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family low > 76
Klebsiella pneumoniae MKP103 0.28 KDGMDA_12845 HTH-type transcriptional regulator SgrR 0.77 KDGMDA_19575 L-threonylcarbamoyladenylate synthase 0.32 17
Escherichia coli Nissle 1917 0.28 ECOLIN_RS00375 DNA-binding transcriptional regulator SgrR 0.77 ECOLIN_RS07625 L-threonylcarbamoyladenylate synthase — —
Escherichia coli ECOR38 0.28 HEPCGN_08725 sgrR DNA-binding transcriptional regulator SgrR 0.77 HEPCGN_25550 yciO L-threonylcarbamoyladenylate synthase low > 88
Escherichia coli BW25113 0.28 b0069 sgrR DNA-binding transcriptional regulator (NCBI) 0.77 b1267 yciO orf, hypothetical protein (VIMSS) — —
Escherichia coli ECRC62 0.28 BNILDI_08515 sgrR DNA-binding transcriptional regulator SgrR 0.77 BNILDI_18450 yciO L-threonylcarbamoyladenylate synthase low > 75
Escherichia fergusonii Becca 0.28 EFB2_03976 HTH-type transcriptional regulator SgrR 0.77 EFB2_02660 putative protein YciO low > 86
Escherichia coli ECOR27 0.28 NOLOHH_03095 sgrR DNA-binding transcriptional regulator SgrR 0.77 NOLOHH_20300 yciO L-threonylcarbamoyladenylate synthase low > 76
Escherichia coli ECRC101 0.28 MCAODC_01255 sgrR DNA-binding transcriptional regulator SgrR 0.77 MCAODC_15625 yciO L-threonylcarbamoyladenylate synthase low > 88
Escherichia coli ECRC98 0.28 JDDGAC_14335 sgrR DNA-binding transcriptional regulator SgrR 0.77 JDDGAC_05185 yciO L-threonylcarbamoyladenylate synthase low > 87
Escherichia coli ECRC99 0.28 KEDOAH_17415 sgrR DNA-binding transcriptional regulator SgrR 0.77 KEDOAH_26110 yciO L-threonylcarbamoyladenylate synthase — —
Rahnella sp. WP5 0.28 EX31_RS03715 HTH-type transcriptional regulator SgrR 0.76 EX31_RS09945 threonylcarbamoyl-AMP synthase low > 89
Escherichia coli ECRC100 0.28 OKFHMN_10740 sgrR DNA-binding transcriptional regulator SgrR 0.77 OKFHMN_02640 yciO L-threonylcarbamoyladenylate synthase low > 79
Escherichia coli ECRC102 0.28 NIAGMN_08590 sgrR DNA-binding transcriptional regulator SgrR 0.77 NIAGMN_26810 yciO L-threonylcarbamoyladenylate synthase low > 80
Escherichia coli BL21 0.28 ECD_00071 transcriptional DNA-binding transcriptional activator of sgrS sRNA 0.77 ECD_01241 putative RNA binding protein low > 61
Escherichia coli HS(pFamp)R (ATCC 700891) 0.27 OHPLBJKB_03589 HTH-type transcriptional regulator SgrR 0.77 OHPLBJKB_02417 putative protein YciO low > 74
Enterobacter sp. TBS_079 0.27 MPMX20_00763 HTH-type transcriptional regulator SgrR 0.76 MPMX20_02508 putative protein YciO low > 85
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.26 GFF170 SgrR, sugar-phosphate stress, transcriptional activator of SgrS small RNA 0.77 GFF2720 Hypothetical YciO protein, TsaC/YrdC paralog low > 78

Not shown: 0 genomes with orthologs for CSW01_17115 only; 60 genomes with orthologs for CSW01_05965 only