Conservation of cofitness between CSW01_04525 and CSW01_05785 in Vibrio cholerae E7946 ATCC 55056

16 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_04525 DUF188 domain-containing protein 1.0 CSW01_05785 23S rRNA pseudouridine synthase E 0.44 11
Rahnella sp. WP5 0.70 EX31_RS20265 YaiI/YqxD family protein 0.54 EX31_RS24585 23S rRNA pseudouridine(2457) synthase RluE low > 89
Pectobacterium carotovorum WPP14 0.70 HER17_RS17270 YaiI/YqxD family protein 0.50 HER17_RS11615 23S rRNA pseudouridine(2457) synthase RluE low > 75
Shewanella loihica PV-4 0.68 Shew_2726 hypothetical protein (RefSeq) 0.54 Shew_1562 pseudouridylate synthase (RefSeq) low > 60
Serratia liquefaciens MT49 0.66 IAI46_18550 YaiI/YqxD family protein 0.55 IAI46_10455 23S rRNA pseudouridine(2457) synthase RluE low > 87
Erwinia tracheiphila HP pepo 2.2 0.64 IJEDHG_26185 YaiI/YqxD family protein 0.49 IJEDHG_00355 rluE 23S rRNA pseudouridine(2457) synthase RluE low > 61
Erwinia tracheiphila SCR3 0.64 LU632_RS18985 YaiI/YqxD family protein 0.50 LU632_RS14565 rluE 23S rRNA pseudouridine(2457) synthase RluE low > 73
Dickeya dianthicola ME23 0.63 DZA65_RS04270 YaiI/YqxD family protein 0.51 DZA65_RS11855 23S rRNA pseudouridine(2457) synthase RluE low > 75
Dickeya dianthicola 67-19 0.63 HGI48_RS04350 YaiI/YqxD family protein 0.51 HGI48_RS11520 23S rRNA pseudouridine(2457) synthase RluE low > 71
Escherichia coli ECOR38 0.61 HEPCGN_07245 yaiI YaiI/YqxD family protein 0.54 HEPCGN_24230 rluE 23S rRNA pseudouridine(2457) synthase RluE low > 88
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.60 GFF4285 Protein YaiI 0.53 GFF3421 Ribosomal large subunit pseudouridine synthase E (EC 4.2.1.70) low > 78
Pseudomonas fluorescens FW300-N2C3 0.39 AO356_12870 hypothetical protein 0.49 AO356_15455 pseudouridine synthase low > 104
Pseudomonas putida KT2440 0.38 PP_5221 conserved protein of unknown function, UPF0178 family 0.50 PP_4778 23S rRNA pseudouridine 2457 synthase low > 96
Pseudomonas sp. DMC3 0.38 GFF340 hypothetical protein 0.50 GFF3909 Ribosomal large subunit pseudouridine synthase E low > 89
Pseudomonas fluorescens FW300-N1B4 0.38 Pf1N1B4_2203 probable P23 protein 0.49 Pf1N1B4_2722 Ribosomal large subunit pseudouridine synthase E (EC 4.2.1.70) low > 87
Pseudomonas fluorescens FW300-N2E3 0.37 AO353_08910 hypothetical protein 0.50 AO353_06330 pseudouridine synthase low > 101
Pseudomonas segetis P6 0.36 MPMX49_04509 hypothetical protein 0.48 MPMX49_01083 Ribosomal large subunit pseudouridine synthase E low > 75

Not shown: 68 genomes with orthologs for CSW01_04525 only; 3 genomes with orthologs for CSW01_05785 only