Conservation of cofitness between CSW01_06405 and CSW01_03950 in Vibrio cholerae E7946 ATCC 55056

26 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_06405 murein L,D-transpeptidase 1.0 CSW01_03950 hypothetical protein 0.44 19
Dickeya dianthicola ME23 0.26 DZA65_RS13465 L,D-transpeptidase 0.32 DZA65_RS16640 YfgM family protein low > 75
Enterobacter sp. TBS_079 0.26 MPMX20_01583 putative L,D-transpeptidase YcbB 0.34 MPMX20_03391 hypothetical protein low > 85
Dickeya dianthicola 67-19 0.26 HGI48_RS13005 L,D-transpeptidase 0.33 HGI48_RS15565 YfgM family protein low > 71
Enterobacter asburiae PDN3 0.26 EX28DRAFT_2011 Uncharacterized protein conserved in bacteria 0.36 EX28DRAFT_0131 Uncharacterized protein conserved in bacteria low > 76
Erwinia tracheiphila SCR3 0.25 LU632_RS09885 ldtD L,D-transpeptidase 0.33 LU632_RS17790 YfgM family protein low > 74
Dickeya dadantii 3937 0.25 DDA3937_RS12930 L,D-transpeptidase 0.31 DDA3937_RS15455 YfgM family protein low > 74
Pectobacterium carotovorum WPP14 0.25 HER17_RS12045 L,D-transpeptidase 0.28 HER17_RS06110 YfgM family protein low > 75
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.25 GFF3682 L,D-transpeptidase YcbB 0.33 GFF2410 Mlr7403 protein low > 78
Pantoea sp. MT58 0.25 IAI47_12780 L,D-transpeptidase 0.33 IAI47_05065 YfgM family protein low > 76
Klebsiella michiganensis M5al 0.25 BWI76_RS09850 L,D-transpeptidase 0.32 BWI76_RS21075 membrane protein low > 92
Escherichia coli ECOR27 0.25 NOLOHH_21960 ldtD L,D-transpeptidase 0.33 NOLOHH_13385 yfgM ancillary SecYEG translocon subunit YfgM low > 75
Escherichia coli ECRC62 0.24 BNILDI_20215 ldtD L,D-transpeptidase 0.33 BNILDI_12185 yfgM ancillary SecYEG translocon subunit YfgM
Escherichia coli BL21 0.24 ECD_00929 murein L,D-transpeptidase 0.33 ECD_02405 ancillary SecYEG translocon subunit; putative anti-RcsB factor low > 61
Escherichia coli Nissle 1917 0.24 ECOLIN_RS04895 L,D-transpeptidase 0.33 ECOLIN_RS14280 ancillary SecYEG translocon subunit YfgM
Escherichia coli HS(pFamp)R (ATCC 700891) 0.24 OHPLBJKB_02742 hypothetical protein 0.33 OHPLBJKB_01196 hypothetical protein low > 73
Escherichia coli BW25113 0.24 b0925 ycbB predicted carboxypeptidase (NCBI) 0.33 b2513 yfgM hypothetical protein (NCBI) low > 76
Escherichia fergusonii Becca 0.24 EFB2_03139 putative L,D-transpeptidase YcbB 0.33 EFB2_01377 hypothetical protein low > 86
Escherichia coli ECOR38 0.24 HEPCGN_23125 ldtD L,D-transpeptidase 0.33 HEPCGN_20855 yfgM ancillary SecYEG translocon subunit YfgM low > 87
Escherichia coli ECRC101 0.24 MCAODC_24790 ldtD L,D-transpeptidase 0.33 MCAODC_12265 yfgM ancillary SecYEG translocon subunit YfgM low > 87
Escherichia coli ECRC98 0.24 JDDGAC_09010 ldtD L,D-transpeptidase 0.33 JDDGAC_25410 yfgM ancillary SecYEG translocon subunit YfgM low > 86
Escherichia coli ECRC100 0.24 OKFHMN_05400 ldtD L,D-transpeptidase 0.33 OKFHMN_21735 yfgM ancillary SecYEG translocon subunit YfgM 0.65 11
Escherichia coli ECRC102 0.24 NIAGMN_03120 ldtD L,D-transpeptidase 0.33 NIAGMN_19505 yfgM ancillary SecYEG translocon subunit YfgM
Escherichia coli ECRC99 0.24 KEDOAH_22335 ldtD L,D-transpeptidase 0.33 KEDOAH_06485 yfgM ancillary SecYEG translocon subunit YfgM
Rhodanobacter sp. FW510-T8 0.17 OKGIIK_00395 Peptidoglycan-binding protein 0.26 OKGIIK_07125 Ancillary SecYEG translocon subunit 0.52 19
Pseudomonas fluorescens FW300-N2E2 0.16 Pf6N2E2_1111 cell wall degradation protein 0.22 Pf6N2E2_3176 Mlr7403 protein
Pseudomonas fluorescens FW300-N2C3 0.16 AO356_26185 peptidoglycan-binding protein 0.23 AO356_06580 GTP-binding protein low > 104

Not shown: 1 genomes with orthologs for CSW01_06405 only; 47 genomes with orthologs for CSW01_03950 only