Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
Vibrio cholerae E7946 ATCC 55056 | 1.0 | CSW01_06405 | | murein L,D-transpeptidase | 1.0 | CSW01_03950 | | hypothetical protein | 0.44 | 19 |
Dickeya dianthicola ME23 | 0.26 | DZA65_RS13465 | | L,D-transpeptidase | 0.32 | DZA65_RS16640 | | YfgM family protein | low | > 75 |
Enterobacter sp. TBS_079 | 0.26 | MPMX20_01583 | | putative L,D-transpeptidase YcbB | 0.34 | MPMX20_03391 | | hypothetical protein | low | > 85 |
Dickeya dianthicola 67-19 | 0.26 | HGI48_RS13005 | | L,D-transpeptidase | 0.33 | HGI48_RS15565 | | YfgM family protein | low | > 71 |
Enterobacter asburiae PDN3 | 0.26 | EX28DRAFT_2011 | | Uncharacterized protein conserved in bacteria | 0.36 | EX28DRAFT_0131 | | Uncharacterized protein conserved in bacteria | low | > 76 |
Erwinia tracheiphila SCR3 | 0.25 | LU632_RS09885 | ldtD | L,D-transpeptidase | 0.33 | LU632_RS17790 | | YfgM family protein | low | > 74 |
Dickeya dadantii 3937 | 0.25 | DDA3937_RS12930 | | L,D-transpeptidase | 0.31 | DDA3937_RS15455 | | YfgM family protein | low | > 74 |
Pectobacterium carotovorum WPP14 | 0.25 | HER17_RS12045 | | L,D-transpeptidase | 0.28 | HER17_RS06110 | | YfgM family protein | low | > 75 |
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.25 | GFF3682 | | L,D-transpeptidase YcbB | 0.33 | GFF2410 | | Mlr7403 protein | low | > 78 |
Pantoea sp. MT58 | 0.25 | IAI47_12780 | | L,D-transpeptidase | 0.33 | IAI47_05065 | | YfgM family protein | low | > 76 |
Klebsiella michiganensis M5al | 0.25 | BWI76_RS09850 | | L,D-transpeptidase | 0.32 | BWI76_RS21075 | | membrane protein | low | > 92 |
Escherichia coli ECOR27 | 0.25 | NOLOHH_21960 | ldtD | L,D-transpeptidase | 0.33 | NOLOHH_13385 | yfgM | ancillary SecYEG translocon subunit YfgM | low | > 75 |
Escherichia coli ECRC62 | 0.24 | BNILDI_20215 | ldtD | L,D-transpeptidase | 0.33 | BNILDI_12185 | yfgM | ancillary SecYEG translocon subunit YfgM | — | — |
Escherichia coli BL21 | 0.24 | ECD_00929 | | murein L,D-transpeptidase | 0.33 | ECD_02405 | | ancillary SecYEG translocon subunit; putative anti-RcsB factor | low | > 61 |
Escherichia coli Nissle 1917 | 0.24 | ECOLIN_RS04895 | | L,D-transpeptidase | 0.33 | ECOLIN_RS14280 | | ancillary SecYEG translocon subunit YfgM | — | — |
Escherichia coli HS(pFamp)R (ATCC 700891) | 0.24 | OHPLBJKB_02742 | | hypothetical protein | 0.33 | OHPLBJKB_01196 | | hypothetical protein | low | > 73 |
Escherichia coli BW25113 | 0.24 | b0925 | ycbB | predicted carboxypeptidase (NCBI) | 0.33 | b2513 | yfgM | hypothetical protein (NCBI) | low | > 76 |
Escherichia fergusonii Becca | 0.24 | EFB2_03139 | | putative L,D-transpeptidase YcbB | 0.33 | EFB2_01377 | | hypothetical protein | low | > 86 |
Escherichia coli ECOR38 | 0.24 | HEPCGN_23125 | ldtD | L,D-transpeptidase | 0.33 | HEPCGN_20855 | yfgM | ancillary SecYEG translocon subunit YfgM | low | > 87 |
Escherichia coli ECRC101 | 0.24 | MCAODC_24790 | ldtD | L,D-transpeptidase | 0.33 | MCAODC_12265 | yfgM | ancillary SecYEG translocon subunit YfgM | low | > 87 |
Escherichia coli ECRC98 | 0.24 | JDDGAC_09010 | ldtD | L,D-transpeptidase | 0.33 | JDDGAC_25410 | yfgM | ancillary SecYEG translocon subunit YfgM | low | > 86 |
Escherichia coli ECRC100 | 0.24 | OKFHMN_05400 | ldtD | L,D-transpeptidase | 0.33 | OKFHMN_21735 | yfgM | ancillary SecYEG translocon subunit YfgM | 0.65 | 11 |
Escherichia coli ECRC102 | 0.24 | NIAGMN_03120 | ldtD | L,D-transpeptidase | 0.33 | NIAGMN_19505 | yfgM | ancillary SecYEG translocon subunit YfgM | — | — |
Escherichia coli ECRC99 | 0.24 | KEDOAH_22335 | ldtD | L,D-transpeptidase | 0.33 | KEDOAH_06485 | yfgM | ancillary SecYEG translocon subunit YfgM | — | — |
Rhodanobacter sp. FW510-T8 | 0.17 | OKGIIK_00395 | | Peptidoglycan-binding protein | 0.26 | OKGIIK_07125 | | Ancillary SecYEG translocon subunit | 0.52 | 19 |
Pseudomonas fluorescens FW300-N2E2 | 0.16 | Pf6N2E2_1111 | | cell wall degradation protein | 0.22 | Pf6N2E2_3176 | | Mlr7403 protein | — | — |
Pseudomonas fluorescens FW300-N2C3 | 0.16 | AO356_26185 | | peptidoglycan-binding protein | 0.23 | AO356_06580 | | GTP-binding protein | low | > 104 |
Not shown: 1 genomes with orthologs for CSW01_06405 only; 47 genomes with orthologs for CSW01_03950 only