Conservation of cofitness between CSW01_03680 and CSW01_03695 in Vibrio cholerae E7946 ATCC 55056

32 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_03680 bifunctional chorismate mutase/prephenate dehydratase 1.0 CSW01_03695 ribosomal large subunit pseudouridine synthase D 0.67 9
Alteromonas macleodii MIT1002 0.57 MIT1002_01316 P-protein 0.59 MIT1002_02679 Ribosomal large subunit pseudouridine synthase D low > 70
Pectobacterium carotovorum WPP14 0.55 HER17_RS05385 bifunctional chorismate mutase/prephenate dehydratase 0.71 HER17_RS05400 23S rRNA pseudouridine(1911/1915/1917) synthase RluD low > 75
Dickeya dianthicola ME23 0.55 DZA65_RS17345 bifunctional chorismate mutase/prephenate dehydratase 0.70 DZA65_RS17330 23S rRNA pseudouridine(1911/1915/1917) synthase RluD low > 75
Dickeya dianthicola 67-19 0.55 HGI48_RS16250 bifunctional chorismate mutase/prephenate dehydratase 0.70 HGI48_RS16235 23S rRNA pseudouridine(1911/1915/1917) synthase RluD low > 71
Dickeya dadantii 3937 0.55 DDA3937_RS16130 bifunctional chorismate mutase/prephenate dehydratase 0.70 DDA3937_RS16110 23S rRNA pseudouridine(1911/1915/1917) synthase RluD low > 74
Enterobacter sp. TBS_079 0.55 MPMX20_03466 Bifunctional chorismate mutase/prephenate dehydratase 0.70 MPMX20_03463 Ribosomal large subunit pseudouridine synthase D low > 85
Enterobacter asburiae PDN3 0.54 EX28DRAFT_2699 chorismate mutase (EC 5.4.99.5) 0.70 EX28DRAFT_2695 pseudouridine synthase, RluA family low > 76
Erwinia amylovora T8 0.53 OLJFJH_09710 bifunctional chorismate mutase/prephenate dehydratase 0.70 OLJFJH_09725 23S rRNA pseudouridine(1911/1915/1917) synthase RluD low > 58
Pantoea agglomerans CFBP13505 P0401 0.53 PagCFBP13516_RS04780 pheA bifunctional chorismate mutase/prephenate dehydratase 0.70 PagCFBP13516_RS04800 rluD 23S rRNA pseudouridine(1911/1915/1917) synthase RluD low > 80
Pantoea sp. MT58 0.53 IAI47_04410 bifunctional chorismate mutase/prephenate dehydratase 0.70 IAI47_04425 23S rRNA pseudouridine(1911/1915/1917) synthase RluD low > 76
Erwinia tracheiphila SCR3 0.53 LU632_RS16960 pheA bifunctional chorismate mutase/prephenate dehydratase 0.68 LU632_RS16945 rluD 23S rRNA pseudouridine(1911/1915/1917) synthase RluD low > 73
Erwinia tracheiphila HP pepo 2.2 0.53 IJEDHG_26900 pheA bifunctional chorismate mutase/prephenate dehydratase 0.68 IJEDHG_26870 rluD 23S rRNA pseudouridine(1911/1915/1917) synthase RluD low > 61
Serratia liquefaciens MT49 0.53 IAI46_03965 bifunctional chorismate mutase/prephenate dehydratase 0.70 IAI46_03985 23S rRNA pseudouridine(1911/1915/1917) synthase RluD low > 87
Klebsiella pneumoniae MRSN742743 0.53 GJGHJB_01184 pheA bifunctional chorismate mutase/prephenate dehydratase 0.70 GJGHJB_01188 rluD 23S rRNA pseudouridine(1911/1915/1917) synthase RluD low > 83
Klebsiella pneumoniae MKP103 0.53 KDGMDA_02160 bifunctional chorismate mutase/prephenate dehydratase 0.70 KDGMDA_02140 23S rRNA pseudouridine(1911/1915/1917) synthase RluD low > 94
Escherichia coli Nissle 1917 0.52 ECOLIN_RS14695 bifunctional chorismate mutase/prephenate dehydratase 0.70 ECOLIN_RS14675 23S rRNA pseudouridine(1911/1915/1917) synthase RluD low > 55
Escherichia coli ECRC99 0.52 KEDOAH_06995 pheA bifunctional chorismate mutase/prephenate dehydratase 0.70 KEDOAH_06970 rluD 23S rRNA pseudouridine(1911/1915/1917) synthase RluD — —
Escherichia coli ECOR38 0.52 HEPCGN_20345 pheA bifunctional chorismate mutase/prephenate dehydratase 0.70 HEPCGN_20375 rluD 23S rRNA pseudouridine(1911/1915/1917) synthase RluD low > 88
Escherichia coli BL21 0.52 ECD_02488 chorismate mutase and prephenate dehydratase, P-protein 0.70 ECD_02484 23S rRNA pseudouridine(1911,1915,1917) synthase low > 61
Escherichia coli ECOR27 0.52 NOLOHH_12900 pheA bifunctional chorismate mutase/prephenate dehydratase 0.71 NOLOHH_12925 rluD 23S rRNA pseudouridine(1911/1915/1917) synthase RluD low > 75
Escherichia coli ECRC101 0.52 MCAODC_11755 pheA bifunctional chorismate mutase/prephenate dehydratase 0.70 MCAODC_11780 rluD 23S rRNA pseudouridine(1911/1915/1917) synthase RluD low > 87
Escherichia coli ECRC98 0.52 JDDGAC_24890 pheA bifunctional chorismate mutase/prephenate dehydratase 0.70 JDDGAC_24915 rluD 23S rRNA pseudouridine(1911/1915/1917) synthase RluD low > 87
Escherichia coli ECRC100 0.52 OKFHMN_21225 pheA bifunctional chorismate mutase/prephenate dehydratase 0.70 OKFHMN_21250 rluD 23S rRNA pseudouridine(1911/1915/1917) synthase RluD low > 79
Escherichia coli ECRC102 0.52 NIAGMN_18995 pheA bifunctional chorismate mutase/prephenate dehydratase 0.70 NIAGMN_19020 rluD 23S rRNA pseudouridine(1911/1915/1917) synthase RluD low > 80
Escherichia coli ECRC62 0.52 BNILDI_11705 pheA bifunctional chorismate mutase/prephenate dehydratase 0.71 BNILDI_11730 rluD 23S rRNA pseudouridine(1911/1915/1917) synthase RluD low > 75
Escherichia coli BW25113 0.52 b2599 pheA fused chorismate mutase P/prephenate dehydratase (NCBI) 0.70 b2594 rluD 23S rRNA pseudouridine synthase (NCBI) — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.52 OHPLBJKB_01109 P-protein 0.70 OHPLBJKB_01112 Ribosomal large subunit pseudouridine synthase D low > 74
Escherichia fergusonii Becca 0.52 EFB2_01293 Bifunctional chorismate mutase/prephenate dehydratase 0.70 EFB2_01296 Ribosomal large subunit pseudouridine synthase D low > 86
Klebsiella michiganensis M5al 0.52 BWI76_RS21465 bifunctional chorismate mutase/prephenate dehydratase 0.69 BWI76_RS21450 23S rRNA pseudouridine(1911/1915/1917) synthase low > 92
Rahnella sp. WP5 0.51 EX31_RS07585 bifunctional chorismate mutase/prephenate dehydratase 0.69 EX31_RS07570 23S rRNA pseudouridine(1911/1915/1917) synthase RluD low > 89
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.49 GFF4179 Chorismate mutase I (EC 5.4.99.5) / Prephenate dehydratase (EC 4.2.1.51) 0.70 GFF4182 Ribosomal large subunit pseudouridine synthase D (EC 4.2.1.70) low > 78
Kangiella aquimarina DSM 16071 0.35 B158DRAFT_1385 Prephenate dehydratase 0.53 B158DRAFT_2532 Pseudouridylate synthases, 23S RNA-specific low > 40

Not shown: 0 genomes with orthologs for CSW01_03680 only; 81 genomes with orthologs for CSW01_03695 only