Conservation of cofitness between CSW01_13485 and CSW01_03155 in Vibrio cholerae E7946 ATCC 55056

12 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_13485 5-carboxymethyl-2-hydroxymuconate isomerase 1.0 CSW01_03155 RNA polymerase-binding transcription factor DksA 0.60 10
Shewanella loihica PV-4 0.38 Shew_1507 5-carboxymethyl-2-hydroxymuconate isomerase (RefSeq) 0.83 Shew_3129 TraR/DksA family transcriptional regulator (RefSeq) — —
Rhodopseudomonas palustris CGA009 0.32 TX73_015475 5-carboxymethyl-2-hydroxymuconate Delta-isomerase 0.30 TX73_020255 RNA polymerase-binding protein DksA low > 86
Pectobacterium carotovorum WPP14 0.29 HER17_RS04690 5-carboxymethyl-2-hydroxymuconate isomerase 0.83 HER17_RS05580 RNA polymerase-binding protein DksA low > 75
Pseudomonas aeruginosa PA14 0.28 IKLFDK_21245 5-carboxymethyl-2-hydroxymuconate isomerase 0.70 IKLFDK_30000 RNA polymerase-binding protein DksA low > 98
Pseudomonas sp. BP01 0.28 JOY50_RS03825 5-carboxymethyl-2-hydroxymuconate Delta-isomerase 0.68 JOY50_RS27695 dksA RNA polymerase-binding protein DksA 0.36 55
Pseudomonas aeruginosa PUPa3 0.28 NPBIFN_00832 5-carboxymethyl-2-hydroxymuconate Delta-isomerase 0.70 NPBIFN_05024 dksA RNA polymerase-binding protein DksA low > 101
Pseudomonas aeruginosa MRSN321 0.28 PFGADD_00830 5-carboxymethyl-2-hydroxymuconate Delta-isomerase 0.70 PFGADD_04947 dksA RNA polymerase-binding protein DksA low > 99
Shewanella amazonensis SB2B 0.28 Sama_2103 putative 5-carboxymethyl-2-hydroxymuconate D-isomerase (RefSeq) 0.82 Sama_0780 TraR/DksA family transcriptional regulator (RefSeq) low > 62
Pseudomonas fluorescens SBW25-INTG 0.27 PFLU_RS11225 5-carboxymethyl-2-hydroxymuconate Delta-isomerase 0.67 PFLU_RS25715 RNA polymerase-binding protein DksA low > 109
Pseudomonas fluorescens SBW25 0.27 PFLU_RS11225 5-carboxymethyl-2-hydroxymuconate Delta-isomerase 0.67 PFLU_RS25715 RNA polymerase-binding protein DksA low > 109
Pseudomonas protegens RBAN4 0.26 FABNJH_17285 hpcD 5-carboxymethyl-2-hydroxymuconate delta-isomerase HpcD 0.69 FABNJH_26620 dksA RNA polymerase-binding protein DksA — —
Pseudomonas sp. RS175 0.25 PFR28_00709 hypothetical protein 0.68 PFR28_03714 RNA polymerase-binding transcription factor DksA low > 88

Not shown: 1 genomes with orthologs for CSW01_13485 only; 63 genomes with orthologs for CSW01_03155 only