Conservation of cofitness between CSW01_15055 and CSW01_02835 in Vibrio cholerae E7946 ATCC 55056

22 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_15055 Bcr/CflA family drug resistance efflux transporter 1.0 CSW01_02835 RNA polymerase sigma factor RpoS 0.77 2
Serratia liquefaciens MT49 0.36 IAI46_24610 multidrug efflux MFS transporter EmrD 0.70 IAI46_03790 RNA polymerase sigma factor RpoS low > 87
Shewanella sp. ANA-3 0.35 Shewana3_1989 emrD multidrug resistance protein D (RefSeq) 0.66 Shewana3_1124 RNA polymerase, sigma 38 subunit, RpoS (RefSeq) low > 73
Shewanella oneidensis MR-1 0.35 SO2389 emrD multidrug resistance protein D (NCBI ptt file) 0.66 SO3432 rpoS RNA polymerase sigma-38 factor (NCBI ptt file) low > 76
Erwinia amylovora T8 0.35 OLJFJH_06025 multidrug efflux MFS transporter EmrD 0.70 OLJFJH_09380 RNA polymerase sigma factor RpoS low > 58
Rahnella sp. WP5 0.34 EX31_RS14280 multidrug efflux MFS transporter EmrD 0.70 EX31_RS07825 RNA polymerase sigma factor RpoS low > 89
Pantoea sp. MT58 0.34 IAI47_00815 multidrug efflux MFS transporter EmrD 0.71 IAI47_04235 RNA polymerase sigma factor RpoS low > 76
Klebsiella pneumoniae MKP103 0.33 KDGMDA_08545 multidrug efflux MFS transporter EmrD 0.70 KDGMDA_03220 RNA polymerase sigma factor RpoS low > 95
Klebsiella michiganensis M5al 0.33 BWI76_RS27845 multidrug transporter EmrD 0.70 BWI76_RS22645 RNA polymerase sigma factor RpoS low > 92
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.33 GFF296 Multidrug resistance protein D 0.70 GFF4788 RNA polymerase sigma factor RpoS low > 78
Escherichia coli BW25113 0.32 b3673 emrD 2-module integral membrane pump; multidrug resistance (VIMSS) 0.70 b2741 rpoS RNA polymerase sigma factor (NCBI) low > 76
Escherichia coli ECRC62 0.32 BNILDI_04225 emrD multidrug efflux MFS transporter EmrD 0.70 BNILDI_10860 rpoS RNA polymerase sigma factor RpoS low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.32 OHPLBJKB_00027 Multidrug resistance protein D 0.70 OHPLBJKB_00992 RNA polymerase sigma factor RpoS low > 74
Escherichia coli BL21 0.32 ECD_03557 multidrug efflux system protein 0.70 ECD_02591 RNA polymerase, sigma S (sigma 38) factor low > 61
Escherichia coli ECOR38 0.32 HEPCGN_13865 emrD multidrug efflux MFS transporter EmrD 0.70 HEPCGN_19675 rpoS RNA polymerase sigma factor RpoS low > 88
Escherichia coli ECRC102 0.32 NIAGMN_12890 emrD multidrug efflux MFS transporter EmrD 0.70 NIAGMN_18265 rpoS RNA polymerase sigma factor RpoS low > 80
Escherichia coli ECOR27 0.32 NOLOHH_07300 emrD multidrug efflux MFS transporter EmrD 0.70 NOLOHH_12310 rpoS RNA polymerase sigma factor RpoS low > 76
Escherichia coli ECRC98 0.32 JDDGAC_18755 emrD multidrug efflux MFS transporter EmrD 0.70 JDDGAC_24160 rpoS RNA polymerase sigma factor RpoS low > 87
Escherichia coli ECRC100 0.32 OKFHMN_15135 emrD multidrug efflux MFS transporter EmrD 0.70 OKFHMN_20495 rpoS RNA polymerase sigma factor RpoS 0.71 29
Escherichia coli ECRC101 0.32 MCAODC_05645 emrD multidrug efflux MFS transporter EmrD 0.70 MCAODC_11020 rpoS RNA polymerase sigma factor RpoS low > 87
Escherichia fergusonii Becca 0.32 EFB2_00025 Multidrug resistance protein D 0.70 EFB2_01169 RNA polymerase sigma factor RpoS low > 86
Enterobacter asburiae PDN3 0.32 EX28DRAFT_3962 Multidrug resistance protein 0.70 EX28DRAFT_2837 RNA polymerase, sigma 38 subunit, RpoS low > 76
Enterobacter sp. TBS_079 0.32 MPMX20_00027 Multidrug resistance protein D 0.70 MPMX20_03627 RNA polymerase sigma factor RpoS low > 85

Not shown: 3 genomes with orthologs for CSW01_15055 only; 40 genomes with orthologs for CSW01_02835 only