Conservation of cofitness between CSW01_14555 and CSW01_02440 in Vibrio cholerae E7946 ATCC 55056

26 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_14555 type VI secretion system contractile sheath large subunit 1.0 CSW01_02440 YggU family protein 0.68 6
Pectobacterium carotovorum WPP14 0.80 HER17_RS04845 type VI secretion system contractile sheath large subunit 0.76 HER17_RS03795 DUF167 family protein YggU low > 75
Dickeya dadantii 3937 0.80 DDA3937_RS07020 type VI secretion system contractile sheath large subunit 0.72 DDA3937_RS17315 YggU family protein low > 74
Dickeya dianthicola ME23 0.79 DZA65_RS08545 type VI secretion system contractile sheath large subunit 0.73 DZA65_RS18450 YggU family protein low > 75
Dickeya dianthicola 67-19 0.79 HGI48_RS07950 type VI secretion system contractile sheath large subunit 0.73 HGI48_RS17360 YggU family protein low > 71
Escherichia coli HS(pFamp)R (ATCC 700891) 0.75 OHPLBJKB_03428 hypothetical protein 0.74 OHPLBJKB_00763 hypothetical protein low > 74
Escherichia coli ECOR27 0.75 NOLOHH_02220 tssC type VI secretion system contractile sheath large subunit 0.74 NOLOHH_11115 yggU DUF167 domain-containing protein low > 75
Escherichia coli ECRC62 0.74 BNILDI_00420 tssC type VI secretion system contractile sheath large subunit 0.74 BNILDI_09695 yggU DUF167 domain-containing protein low > 75
Pseudomonas fluorescens FW300-N2E2 0.74 Pf6N2E2_4299 Uncharacterized protein ImpC 0.46 Pf6N2E2_4598 COG1872 low > 103
Pseudomonas sp. S08-1 0.73 OH686_12860 T6SS component TssC (ImpC/VipB) 0.44 OH686_10990 hypothetical protein low > 80
Pseudomonas fluorescens FW300-N1B4 0.73 Pf1N1B4_2084 Uncharacterized protein ImpC 0.47 Pf1N1B4_2339 COG1872 low > 87
Pseudomonas fluorescens FW300-N2E3 0.73 AO353_09445 type VI secretion protein 0.47 AO353_08175 hypothetical protein — —
Escherichia fergusonii Becca 0.71 EFB2_03811 hypothetical protein 0.74 EFB2_00949 hypothetical protein low > 86
Escherichia coli ECRC101 0.70 MCAODC_00380 tssC type VI secretion system contractile sheath large subunit 0.73 MCAODC_09765 yggU DUF167 domain-containing protein low > 87
Escherichia coli ECRC102 0.70 NIAGMN_07710 tssC type VI secretion system contractile sheath large subunit 0.73 NIAGMN_17010 yggU DUF167 domain-containing protein low > 80
Escherichia coli ECRC100 0.70 OKFHMN_09860 tssC type VI secretion system contractile sheath large subunit 0.73 OKFHMN_19245 yggU DUF167 domain-containing protein low > 79
Escherichia coli ECRC98 0.70 JDDGAC_13460 tssC type VI secretion system contractile sheath large subunit 0.73 JDDGAC_22875 yggU DUF167 domain-containing protein low > 87
Escherichia coli ECRC99 0.70 KEDOAH_18290 tssC type VI secretion system contractile sheath large subunit 0.73 KEDOAH_08895 yggU DUF167 domain-containing protein — —
Rahnella sp. WP5 0.43 EX31_RS01855 type VI secretion system contractile sheath large subunit 0.70 EX31_RS02700 YggU family protein low > 89
Enterobacter asburiae PDN3 0.43 EX28DRAFT_0243 type VI secretion protein, EvpB/VC_A0108 family 0.76 EX28DRAFT_2991 TIGR00251 family protein low > 76
Enterobacter sp. TBS_079 0.43 MPMX20_01628 hypothetical protein 0.77 MPMX20_03811 hypothetical protein low > 85
Klebsiella pneumoniae MRSN742743 0.42 GJGHJB_02800 tssC type VI secretion system contractile sheath large subunit VipB 0.72 GJGHJB_00733 yggU DUF167 domain-containing protein low > 83
Klebsiella pneumoniae MKP103 0.42 KDGMDA_20355 type VI secretion system contractile sheath large subunit VipB 0.73 KDGMDA_04625 DUF167 domain-containing protein low > 94
Escherichia coli Nissle 1917 0.41 ECOLIN_RS15700 type VI secretion system contractile sheath large subunit 0.74 ECOLIN_RS16425 DUF167 family protein YggU low > 55
Pseudomonas protegens RBAN4 0.35 FABNJH_30710 tssC type VI secretion system tubule-forming protein VipB 0.49 FABNJH_29440 UPF0235 protein PFL_5841 — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.34 GFF4056 Uncharacterized protein ImpC 0.74 GFF3056 COG1872 low > 78
Serratia liquefaciens MT49 0.33 IAI46_05535 type VI secretion system contractile sheath large subunit 0.73 IAI46_21425 YggU family protein low > 87

Not shown: 42 genomes with orthologs for CSW01_14555 only; 11 genomes with orthologs for CSW01_02440 only