Conservation of cofitness between CSW01_11920 and CSW01_01555 in Vibrio cholerae E7946 ATCC 55056

22 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_11920 NupC/NupG family nucleoside CNT transporter 1.0 CSW01_01555 ATP-dependent RNA helicase RhlB 0.93 16
Klebsiella pneumoniae MKP103 0.70 KDGMDA_12395 NupC/NupG family nucleoside CNT transporter 0.72 KDGMDA_09545 ATP-dependent RNA helicase RhlB low > 95
Serratia liquefaciens MT49 0.69 IAI46_02905 NupC/NupG family nucleoside CNT transporter 0.71 IAI46_00575 ATP-dependent RNA helicase RhlB low > 87
Klebsiella michiganensis M5al 0.69 BWI76_RS04125 NupC/NupG family nucleoside CNT transporter 0.71 BWI76_RS01065 ATP-dependent RNA helicase RhlB low > 92
Pectobacterium carotovorum WPP14 0.67 HER17_RS19040 NupC/NupG family nucleoside CNT transporter 0.71 HER17_RS01130 ATP-dependent RNA helicase RhlB low > 75
Shewanella amazonensis SB2B 0.66 Sama_0971 nucleoside transporter (RefSeq) 0.64 Sama_3215 ATP-dependent RNA helicase RhlB (RefSeq) low > 62
Shewanella loihica PV-4 0.66 Shew_2817 nucleoside transporter (RefSeq) 0.67 Shew_0339 ATP-dependent RNA helicase RhlB (RefSeq) — —
Shewanella sp. ANA-3 0.65 Shewana3_1039 nucleoside permease (cytidine, inosine, uridine, or thymidine) (from data) 0.65 Shewana3_0410 ATP-dependent RNA helicase RhlB (RefSeq) low > 73
Shewanella oneidensis MR-1 0.65 SO1214 NupC family protein (NCBI ptt file) 0.66 SO0407 ATP-dependent RNA helicase, DEAD box family (NCBI ptt file) low > 76
Alteromonas macleodii MIT1002 0.57 MIT1002_03499 Nucleoside permease NupX 0.60 MIT1002_00515 ATP-dependent RNA helicase RhlB low > 70
Escherichia fergusonii Becca 0.47 EFB2_01693 Putative pseudouridine transporter 0.72 EFB2_04858 ATP-dependent RNA helicase RhlB low > 86
Escherichia coli Nissle 1917 0.47 ECOLIN_RS12660 NupC/NupG family nucleoside CNT transporter 0.72 ECOLIN_RS21700 ATP-dependent RNA helicase RhlB low > 55
Escherichia coli BW25113 0.47 b2161 yeiJ predicted nucleoside transporter (NCBI) 0.72 b3780 rhlB ATP-dependent RNA helicase (NCBI) low > 76
Escherichia coli ECOR38 0.47 HEPCGN_22740 nupX Putative nucleoside permease NupX 0.72 HEPCGN_13310 rhlB ATP-dependent RNA helicase RhlB low > 88
Escherichia coli ECRC62 0.47 BNILDI_13970 nupX Putative nucleoside permease NupX 0.72 BNILDI_04790 rhlB ATP-dependent RNA helicase RhlB low > 75
Escherichia coli ECOR27 0.47 NOLOHH_15035 psuT Putative pseudouridine transporter 0.72 NOLOHH_06735 rhlB ATP-dependent RNA helicase RhlB low > 76
Escherichia coli ECRC102 0.47 NIAGMN_21240 nupX Putative nucleoside permease NupX 0.72 NIAGMN_12355 rhlB ATP-dependent RNA helicase RhlB low > 80
Escherichia coli ECRC101 0.47 MCAODC_14525 nupX Putative nucleoside permease NupX 0.72 MCAODC_05105 rhlB ATP-dependent RNA helicase RhlB low > 87
Escherichia coli ECRC99 0.47 KEDOAH_04710 nupX Putative nucleoside permease NupX 0.72 KEDOAH_13550 rhlB ATP-dependent RNA helicase RhlB — —
Escherichia coli ECRC98 0.47 JDDGAC_27435 nupX Putative nucleoside permease NupX 0.72 JDDGAC_18220 rhlB ATP-dependent RNA helicase RhlB low > 87
Escherichia coli ECRC100 0.47 OKFHMN_23475 nupX Putative nucleoside permease NupX 0.72 OKFHMN_14600 rhlB ATP-dependent RNA helicase RhlB low > 79
Escherichia coli HS(pFamp)R (ATCC 700891) 0.47 OHPLBJKB_01550 Putative nucleoside permease NupX 0.72 OHPLBJKB_04274 ATP-dependent RNA helicase RhlB low > 74
Escherichia coli BL21 0.46 ECD_02090 nucleoside permease 0.72 ECD_03658 ATP-dependent RNA helicase low > 61

Not shown: 4 genomes with orthologs for CSW01_11920 only; 21 genomes with orthologs for CSW01_01555 only