Conservation of cofitness between CSW01_11405 and CSW01_01245 in Vibrio cholerae E7946 ATCC 55056

28 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_11405 EEP domain-containing protein 1.0 CSW01_01245 lipopolysaccharide heptosyltransferase II 0.66 7
Klebsiella pneumoniae MRSN742743 0.32 GJGHJB_04055 yafD endonuclease/exonuclease/phosphatase family protein 0.45 GJGHJB_00151 rfaF ADP-heptose--LPS heptosyltransferase RfaF — —
Klebsiella pneumoniae MKP103 0.32 KDGMDA_13675 endonuclease/exonuclease/phosphatase family protein 0.45 KDGMDA_07950 ADP-heptose--LPS heptosyltransferase RfaF low > 94
Enterobacter sp. TBS_079 0.32 MPMX20_00894 hypothetical protein 0.49 MPMX20_00113 ADP-heptose--LPS heptosyltransferase 2 — —
Klebsiella michiganensis M5al 0.32 BWI76_RS05425 EEP domain-containing protein 0.49 BWI76_RS27265 ADP-heptose--LPS heptosyltransferase II — —
Enterobacter asburiae PDN3 0.32 EX28DRAFT_2685 Uncharacterized protein conserved in bacteria 0.50 EX28DRAFT_3872 lipopolysaccharide heptosyltransferase II — —
Escherichia coli BW25113 0.32 b0209 yafD hypothetical protein (NCBI) 0.50 b3620 rfaF ADP-heptose:LPS heptosyltransferase II (NCBI) low > 76
Escherichia coli ECRC101 0.32 MCAODC_00510 yafD endonuclease/exonuclease/phosphatase family protein 0.50 MCAODC_06205 rfaF ADP-heptose--LPS heptosyltransferase RfaF — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.32 OHPLBJKB_03452 hypothetical protein 0.50 OHPLBJKB_00080 ADP-heptose--LPS heptosyltransferase 2 — —
Escherichia coli ECRC98 0.32 JDDGAC_13590 yafD endonuclease/exonuclease/phosphatase family protein 0.50 JDDGAC_19320 rfaF ADP-heptose--LPS heptosyltransferase RfaF low > 87
Escherichia coli Nissle 1917 0.32 ECOLIN_RS01145 endonuclease/exonuclease/phosphatase family protein 0.50 ECOLIN_RS20650 ADP-heptose--LPS heptosyltransferase RfaF low > 55
Escherichia coli ECOR38 0.32 HEPCGN_07935 yafD endonuclease/exonuclease/phosphatase family protein 0.50 HEPCGN_14540 rfaF ADP-heptose--LPS heptosyltransferase RfaF low > 88
Escherichia coli ECRC100 0.32 OKFHMN_09995 yafD endonuclease/exonuclease/phosphatase family protein 0.50 OKFHMN_15695 rfaF ADP-heptose--LPS heptosyltransferase RfaF low > 79
Escherichia coli ECRC62 0.32 BNILDI_09330 yafD endonuclease/exonuclease/phosphatase family protein 0.50 BNILDI_03935 rfaF ADP-heptose--LPS heptosyltransferase RfaF — —
Escherichia fergusonii Becca 0.32 EFB2_03834 hypothetical protein 0.50 EFB2_00191 ADP-heptose--LPS heptosyltransferase 2 — —
Escherichia coli BL21 0.32 ECD_00202 endo/exonuclease/phosphatase family protein 0.50 ECD_03477 ADP-heptose:LPS heptosyltransferase II — —
Escherichia coli ECRC99 0.32 KEDOAH_18160 yafD endonuclease/exonuclease/phosphatase family protein 0.50 KEDOAH_12455 rfaF ADP-heptose--LPS heptosyltransferase RfaF — —
Escherichia coli ECRC102 0.32 NIAGMN_07845 yafD endonuclease/exonuclease/phosphatase family protein 0.50 NIAGMN_13455 rfaF ADP-heptose--LPS heptosyltransferase RfaF low > 80
Escherichia coli ECOR27 0.32 NOLOHH_02340 yafD endonuclease/exonuclease/phosphatase family protein 0.50 NOLOHH_07575 rfaF ADP-heptose--LPS heptosyltransferase RfaF low > 75
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.31 GFF4041 FIG00613320: hypothetical protein 0.50 GFF391 ADP-heptose--lipooligosaccharide heptosyltransferase II (EC 2.4.1.-) 0.50 43
Erwinia tracheiphila SCR3 0.31 LU632_RS01070 endonuclease/exonuclease/phosphatase family protein 0.48 LU632_RS21920 rfaF ADP-heptose--LPS heptosyltransferase RfaF — —
Erwinia tracheiphila HP pepo 2.2 0.31 IJEDHG_15370 endonuclease/exonuclease/phosphatase family protein 0.48 IJEDHG_07865 rfaF ADP-heptose--LPS heptosyltransferase RfaF — —
Serratia liquefaciens MT49 0.31 IAI46_04125 endonuclease/exonuclease/phosphatase family protein 0.49 IAI46_24740 ADP-heptose--LPS heptosyltransferase RfaF — —
Pectobacterium carotovorum WPP14 0.30 HER17_RS05445 endonuclease/exonuclease/phosphatase family protein 0.51 HER17_RS20775 ADP-heptose--LPS heptosyltransferase RfaF low > 75
Pantoea agglomerans CFBP13505 P0401 0.30 PagCFBP13516_RS15660 endonuclease/exonuclease/phosphatase family protein 0.48 PagCFBP13516_RS00675 rfaF ADP-heptose--LPS heptosyltransferase RfaF — —
Pantoea sp. MT58 0.30 IAI47_15350 endonuclease/exonuclease/phosphatase family protein 0.48 IAI47_00685 ADP-heptose--LPS heptosyltransferase RfaF — —
Rahnella sp. WP5 0.30 EX31_RS21210 endonuclease/exonuclease/phosphatase family protein 0.50 EX31_RS14400 ADP-heptose--LPS heptosyltransferase RfaF low > 89
Dickeya dianthicola ME23 0.29 DZA65_RS17280 endonuclease/exonuclease/phosphatase family protein 0.49 DZA65_RS00820 ADP-heptose--LPS heptosyltransferase RfaF — —
Dickeya dianthicola 67-19 0.29 HGI48_RS16190 endonuclease/exonuclease/phosphatase family protein 0.49 HGI48_RS00765 ADP-heptose--LPS heptosyltransferase RfaF — —

Not shown: 1 genomes with orthologs for CSW01_11405 only; 41 genomes with orthologs for CSW01_01245 only