Conservation of cofitness between CSW01_02735 and CSW01_01175 in Vibrio cholerae E7946 ATCC 55056

24 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_02735 integrase 1.0 CSW01_01175 formamidopyrimidine-DNA glycosylase 0.47 15
Dickeya dianthicola ME23 0.51 DZA65_RS04000 tyrosine-type recombinase/integrase 0.58 DZA65_RS00770 bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase low > 75
Serratia liquefaciens MT49 0.51 IAI46_19665 tyrosine-type recombinase/integrase 0.59 IAI46_24810 bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase low > 87
Pectobacterium carotovorum WPP14 0.50 HER17_RS17450 integrase domain-containing protein 0.57 HER17_RS20815 bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase low > 75
Escherichia coli ECOR38 0.35 HEPCGN_14290 fimB integrase 0.60 HEPCGN_14460 mutM bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase low > 88
Escherichia fergusonii Becca 0.34 EFB2_00121 Prophage integrase IntS 0.60 EFB2_00178 Formamidopyrimidine-DNA glycosylase low > 86
Escherichia coli Nissle 1917 0.34 ECOLIN_RS26185 integrase arm-type DNA-binding domain-containing protein 0.60 ECOLIN_RS20715 bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase low > 55
Escherichia coli ECRC99 0.34 KEDOAH_12640 fimB integrase 0.60 KEDOAH_12515 Formamidopyrimidine-DNA glycosylase — —
Escherichia coli ECRC100 0.34 OKFHMN_15505 fimB integrase 0.60 OKFHMN_15635 Formamidopyrimidine-DNA glycosylase low > 79
Escherichia coli ECRC98 0.34 JDDGAC_19130 fimB integrase 0.60 JDDGAC_19260 Formamidopyrimidine-DNA glycosylase low > 87
Escherichia coli ECRC101 0.34 MCAODC_06015 fimB integrase 0.60 MCAODC_06145 Formamidopyrimidine-DNA glycosylase low > 87
Escherichia coli ECRC102 0.34 NIAGMN_13265 fimB integrase 0.60 NIAGMN_13395 Formamidopyrimidine-DNA glycosylase low > 80
Rahnella sp. WP5 0.33 EX31_RS20945 tyrosine-type recombinase/integrase 0.60 EX31_RS14455 bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase low > 89
Erwinia amylovora T8 0.31 OLJFJH_17590 integrase 0.61 OLJFJH_05810 bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase low > 58
Pseudomonas fluorescens SBW25 0.28 PFLU_RS09280 DUF4102 domain-containing protein 0.51 PFLU_RS28515 bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase low > 109
Pseudomonas fluorescens SBW25-INTG 0.28 PFLU_RS09280 DUF4102 domain-containing protein 0.51 PFLU_RS28515 bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase low > 109
Rhodanobacter sp000427505 FW510-R12 0.28 LRK53_RS01970 integrase arm-type DNA-binding domain-containing protein 0.53 LRK53_RS03605 bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase low > 59
Xanthobacter sp. DMC5 0.27 GFF870 Prophage integrase IntS 0.38 GFF2040 Formamidopyrimidine-DNA glycosylase — —
Rhodanobacter sp. FW510-T8 0.26 OKGIIK_15870 integrase 0.54 OKGIIK_13060 mutM bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase low > 53
Rhodanobacter denitrificans MT42 0.23 LRK55_RS10445 tyrosine-type recombinase/integrase 0.53 LRK55_RS10505 bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase low > 63
Ralstonia solanacearum PSI07 0.23 RPSI07_RS12430 DUF4102 domain-containing protein 0.40 RPSI07_RS22175 bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase low > 81
Burkholderia phytofirmans PsJN 0.17 BPHYT_RS32385 integrase 0.42 BPHYT_RS02870 formamidopyrimidine-DNA glycosylase low > 109
Sinorhizobium meliloti 1021 0.15 SMc03246 integrase DNA protein 0.32 SMc01154 formamidopyrimidine-DNA glycosylase low > 103
Bosea sp. OAE506 0.14 ABIE41_RS07475 site-specific integrase 0.30 ABIE41_RS04205 bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase low > 77
Variovorax sp. SCN45 0.07 GFF7326 Integrase 0.38 GFF2353 Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23) low > 127

Not shown: 0 genomes with orthologs for CSW01_02735 only; 81 genomes with orthologs for CSW01_01175 only