Conservation of cofitness between CSW01_03685 and CSW01_00450 in Vibrio cholerae E7946 ATCC 55056

30 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_03685 ribosomal subunit interface protein 1.0 CSW01_00450 SCP2 domain-containing protein 0.58 4
Rahnella sp. WP5 0.53 EX31_RS07580 ribosome-associated translation inhibitor RaiA 0.34 EX31_RS14620 SCP2 domain-containing protein low > 89
Pantoea sp. MT58 0.50 IAI47_04415 ribosome-associated translation inhibitor RaiA 0.33 IAI47_18280 SCP2 domain-containing protein — —
Pantoea agglomerans CFBP13505 P0401 0.50 PagCFBP13516_RS04790 raiA ribosome-associated translation inhibitor RaiA 0.35 PagCFBP13516_RS18530 ubiJ ubiquinone biosynthesis protein UbiJ — —
Dickeya dadantii 3937 0.50 DDA3937_RS16120 ribosome-associated translation inhibitor RaiA 0.36 DDA3937_RS20325 SCP2 domain-containing protein — —
Dickeya dianthicola ME23 0.50 DZA65_RS17340 ribosome-associated translation inhibitor RaiA 0.36 DZA65_RS00960 SCP2 domain-containing protein — —
Serratia liquefaciens MT49 0.50 IAI46_03975 ribosome-associated translation inhibitor RaiA 0.34 IAI46_01070 SCP2 domain-containing protein low > 87
Dickeya dianthicola 67-19 0.50 HGI48_RS16245 ribosome-associated translation inhibitor RaiA 0.36 HGI48_RS00900 SCP2 domain-containing protein — —
Pectobacterium carotovorum WPP14 0.49 HER17_RS05390 ribosome-associated translation inhibitor RaiA 0.28 HER17_RS20605 SCP2 domain-containing protein — —
Erwinia amylovora T8 0.49 OLJFJH_09715 ribosome-associated translation inhibitor RaiA 0.35 OLJFJH_06505 Ubiquinone biosynthesis accessory factor UbiJ — —
Klebsiella pneumoniae MRSN742743 0.48 GJGHJB_01186 raiA ribosome-associated translation inhibitor RaiA 0.35 GJGHJB_04806 ubiJ Ubiquinone biosynthesis accessory factor UbiJ — —
Klebsiella pneumoniae MKP103 0.48 KDGMDA_02150 ribosome-associated translation inhibitor RaiA 0.35 KDGMDA_09800 Ubiquinone biosynthesis accessory factor UbiJ — —
Klebsiella michiganensis M5al 0.48 BWI76_RS21460 translation inhibitor protein RaiA 0.35 BWI76_RS01310 SCP2 domain-containing protein — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.48 GFF4180 Ribosome hibernation protein YfiA 0.35 GFF261 Protein YigP (COG3165) clustered with ubiquinone biosynthetic genes low > 78
Escherichia fergusonii Becca 0.48 EFB2_01294 Ribosome-associated inhibitor A 0.33 EFB2_04781 Ubiquinone biosynthesis accessory factor UbiJ low > 86
Escherichia coli HS(pFamp)R (ATCC 700891) 0.48 OHPLBJKB_01110 Ribosome-associated inhibitor A 0.34 OHPLBJKB_04217 hypothetical protein low > 74
Enterobacter asburiae PDN3 0.48 EX28DRAFT_2697 ribosomal subunit interface protein 0.35 EX28DRAFT_4499 Uncharacterized protein conserved in bacteria low > 76
Escherichia coli ECRC100 0.48 OKFHMN_21235 raiA ribosome-associated translation inhibitor RaiA 0.33 OKFHMN_14300 ubiJ ubiquinone biosynthesis protein UbiJ — —
Escherichia coli BL21 0.48 ECD_02486 cold shock protein associated with 30S ribosomal subunit 0.34 ECD_03727 aerobic ubiquinone synthesis protein, SCP2 family protein low > 61
Escherichia coli ECOR38 0.48 HEPCGN_20355 raiA ribosome-associated translation inhibitor RaiA 0.33 HEPCGN_12930 ubiJ ubiquinone biosynthesis protein UbiJ low > 88
Escherichia coli ECRC62 0.48 BNILDI_11715 raiA ribosome-associated translation inhibitor RaiA 0.34 BNILDI_05100 ubiJ ubiquinone biosynthesis protein UbiJ — —
Escherichia coli Nissle 1917 0.48 ECOLIN_RS14690 ribosome-associated translation inhibitor RaiA 0.33 ECOLIN_RS22120 ubiquinone biosynthesis protein UbiJ — —
Escherichia coli ECRC98 0.48 JDDGAC_24900 raiA ribosome-associated translation inhibitor RaiA 0.33 JDDGAC_17925 ubiJ ubiquinone biosynthesis protein UbiJ — —
Escherichia coli ECRC101 0.48 MCAODC_11765 raiA ribosome-associated translation inhibitor RaiA 0.33 MCAODC_04805 ubiJ ubiquinone biosynthesis protein UbiJ — —
Escherichia coli ECOR27 0.48 NOLOHH_12910 raiA ribosome-associated translation inhibitor RaiA 0.34 NOLOHH_06430 ubiJ ubiquinone biosynthesis protein UbiJ — —
Escherichia coli ECRC99 0.48 KEDOAH_06985 raiA ribosome-associated translation inhibitor RaiA 0.33 KEDOAH_13850 ubiJ ubiquinone biosynthesis protein UbiJ — —
Enterobacter sp. TBS_079 0.48 MPMX20_03465 Ribosome-associated inhibitor A 0.35 MPMX20_04446 Ubiquinone biosynthesis accessory factor UbiJ — —
Escherichia coli BW25113 0.48 b2597 yfiA cold shock protein associated with 30S ribosomal subunit (NCBI) 0.34 b3834 yigP hypothetical protein (NCBI) low > 76
Escherichia coli ECRC102 0.48 NIAGMN_19005 raiA ribosome-associated translation inhibitor RaiA 0.33 NIAGMN_12055 ubiJ ubiquinone biosynthesis protein UbiJ — —
Erwinia tracheiphila SCR3 0.47 LU632_RS16955 raiA ribosome-associated translation inhibitor RaiA 0.33 LU632_RS24000 SCP2 domain-containing protein — —
Shewanella oneidensis MR-1 0.40 SO3422 yfiA-2 ribosomal subunit interface protein (NCBI ptt file) 0.28 SO4200 conserved hypothetical protein (NCBI ptt file) — —

Not shown: 1 genomes with orthologs for CSW01_03685 only; 4 genomes with orthologs for CSW01_00450 only