Conservation of cofitness between CA264_00025 and CA264_03075 in Pontibacter actiniarum KMM 6156, DSM 19842

21 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pontibacter actiniarum KMM 6156, DSM 19842 1.0 CA264_00025 RIP metalloprotease RseP 1.0 CA264_03075 lipopolysaccharide biosynthesis protein 0.58 9
Bacteroides thetaiotaomicron VPI-5482 0.35 BT2001 membrane-associated zinc metalloprotease (NCBI ptt file) 0.16 BT1717 putative lipopolysaccharide biosynthesis protein (NCBI ptt file) — —
Phocaeicola dorei CL03T12C01 0.35 ABI39_RS08170 RIP metalloprotease RseP 0.15 ABI39_RS11120 lipopolysaccharide biosynthesis protein — —
Herbaspirillum seropedicae SmR1 0.21 HSERO_RS10910 peptidase 0.16 HSERO_RS10020 flippase low > 78
Alteromonas macleodii MIT1002 0.19 MIT1002_01011 Regulator of sigma E protease 0.11 MIT1002_02859 Teichuronic acid biosynthesis protein TuaB low > 70
Rahnella sp. WP5 0.17 EX31_RS13000 sigma E protease regulator RseP 0.11 EX31_RS02890 lipopolysaccharide biosynthesis protein — —
Klebsiella michiganensis M5al 0.17 BWI76_RS05250 zinc metallopeptidase RseP 0.14 BWI76_RS19015 lipopolysaccharide biosynthesis protein — —
Escherichia coli ECRC62 0.17 BNILDI_09150 rseP sigma E protease regulator RseP 0.12 BNILDI_14625 wzxC colanic acid undecaprenyl disphosphate flippase WzxC — —
Escherichia fergusonii Becca 0.17 EFB2_03868 Regulator of sigma-E protease RseP 0.13 EFB2_01808 Lipopolysaccharide biosynthesis protein WzxC — —
Escherichia coli Nissle 1917 0.17 ECOLIN_RS00960 sigma E protease regulator RseP 0.13 ECOLIN_RS12060 colanic acid undecaprenyl disphosphate flippase WzxC — —
Escherichia coli ECRC102 0.17 NIAGMN_08025 rseP sigma E protease regulator RseP 0.13 NIAGMN_22325 wzxC colanic acid undecaprenyl disphosphate flippase WzxC — —
Escherichia coli ECRC98 0.17 JDDGAC_13770 rseP sigma E protease regulator RseP 0.13 JDDGAC_28490 wzxC colanic acid undecaprenyl disphosphate flippase WzxC — —
Escherichia coli BL21 0.17 ECD_00174 inner membrane zinc RIP metalloprotease; RpoE activator, by degrading RseA; cleaved signal peptide endoprotease 0.13 ECD_01952 putative colanic acid exporter — —
Escherichia coli ECOR38 0.17 HEPCGN_08130 rseP sigma E protease regulator RseP 0.14 HEPCGN_03080 wzxC colanic acid undecaprenyl disphosphate flippase WzxC — —
Escherichia coli ECRC99 0.17 KEDOAH_17980 rseP sigma E protease regulator RseP 0.13 KEDOAH_03770 wzxC colanic acid undecaprenyl disphosphate flippase WzxC — —
Escherichia coli BW25113 0.17 b0176 yaeL zinc metallopeptidase (NCBI) 0.14 b2046 wzxC colanic acid exporter (NCBI) — —
Escherichia coli ECRC100 0.17 OKFHMN_10175 rseP sigma E protease regulator RseP 0.13 OKFHMN_24380 wzxC colanic acid undecaprenyl disphosphate flippase WzxC — —
Escherichia coli ECRC101 0.17 MCAODC_00690 rseP sigma E protease regulator RseP 0.13 MCAODC_20560 wzxC colanic acid undecaprenyl disphosphate flippase WzxC — —
Escherichia coli ECOR27 0.17 NOLOHH_02520 rseP sigma E protease regulator RseP 0.13 NOLOHH_15710 wzxC colanic acid undecaprenyl disphosphate flippase WzxC — —
Enterobacter asburiae PDN3 0.16 EX28DRAFT_3764 RIP metalloprotease RseP 0.12 EX28DRAFT_0509 Membrane protein involved in the export of O-antigen and teichoic acid — —
Pseudomonas fluorescens FW300-N2E2 0.16 Pf6N2E2_3062 Membrane-associated zinc metalloprotease 0.13 Pf6N2E2_2505 Lipopolysaccharide biosynthesis protein WzxC — —
Enterobacter sp. TBS_079 0.16 MPMX20_00860 Regulator of sigma-E protease RseP 0.11 MPMX20_03028 Lipopolysaccharide biosynthesis protein WzxC — —

Not shown: 62 genomes with orthologs for CA264_00025 only; 3 genomes with orthologs for CA264_03075 only