Conservation of cofitness between BNILDI_05055 and BNILDI_06970 in Escherichia coli ECRC62

26 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli ECRC62 1.0 BNILDI_05055 pldB lysophospholipase L2 1.0 BNILDI_06970 hfq RNA chaperone Hfq 0.88 5
Escherichia coli BW25113 1.00 b3825 pldB lysophospholipase L(2) (NCBI) 1.00 b4172 hfq RNA-binding protein Hfq (NCBI) low > 76
Escherichia coli ECOR27 1.00 NOLOHH_06475 pldB lysophospholipase L2 1.00 NOLOHH_04520 hfq RNA chaperone Hfq low > 75
Escherichia coli Nissle 1917 1.00 ECOLIN_RS21960 lysophospholipase L2 1.00 ECOLIN_RS24230 RNA chaperone Hfq — —
Escherichia coli BL21 1.00 ECD_03704 lysophospholipase L2 1.00 ECD_04039 global sRNA chaperone; HF-I, host factor for RNA phage Q beta replication low > 61
Escherichia fergusonii Becca 1.00 EFB2_04812 Lysophospholipase L2 1.00 EFB2_04363 RNA-binding protein Hfq low > 86
Escherichia coli ECRC101 1.00 MCAODC_04850 pldB lysophospholipase L2 1.00 MCAODC_02770 hfq RNA chaperone Hfq low > 87
Escherichia coli ECRC98 1.00 JDDGAC_17970 pldB lysophospholipase L2 1.00 JDDGAC_15895 hfq RNA chaperone Hfq low > 86
Escherichia coli ECRC102 1.00 NIAGMN_12100 pldB lysophospholipase L2 1.00 NIAGMN_10105 hfq RNA chaperone Hfq — —
Escherichia coli ECRC100 1.00 OKFHMN_14345 pldB lysophospholipase L2 1.00 OKFHMN_12255 hfq RNA chaperone Hfq low > 80
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_04226 Lysophospholipase L2 1.00 OHPLBJKB_03870 RNA-binding protein Hfq low > 73
Escherichia coli ECRC99 1.00 KEDOAH_13805 pldB lysophospholipase L2 1.00 KEDOAH_15900 hfq RNA chaperone Hfq — —
Escherichia coli ECOR38 1.00 HEPCGN_13045 pldB lysophospholipase L2 1.00 HEPCGN_10485 hfq RNA chaperone Hfq low > 87
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.84 GFF251 Lysophospholipase L2 (EC 3.1.1.5) 0.96 GFF825 RNA-binding protein Hfq low > 78
Enterobacter sp. TBS_079 0.83 MPMX20_04455 Lysophospholipase L2 0.91 MPMX20_00453 RNA-binding protein Hfq low > 85
Enterobacter asburiae PDN3 0.82 EX28DRAFT_4490 Lysophospholipase 0.92 EX28DRAFT_3369 RNA chaperone Hfq low > 76
Klebsiella michiganensis M5al 0.80 BWI76_RS01260 lysophospholipase L2 0.90 BWI76_RS02535 RNA-binding protein Hfq — —
Serratia liquefaciens MT49 0.63 IAI46_00785 lysophospholipase L2 0.81 IAI46_01625 RNA chaperone Hfq low > 86
Pantoea sp. MT58 0.62 IAI47_18340 lysophospholipase L2 0.75 IAI47_02590 RNA chaperone Hfq low > 76
Rahnella sp. WP5 0.61 EX31_RS15225 lysophospholipase L2 0.84 EX31_RS08820 RNA chaperone Hfq low > 89
Erwinia tracheiphila SCR3 0.59 LU632_RS24080 pldB lysophospholipase L2 0.86 LU632_RS02055 hfq RNA chaperone Hfq — —
Dickeya dadantii 3937 0.58 DDA3937_RS19830 lysophospholipase L2 0.76 DDA3937_RS18610 RNA chaperone Hfq low > 74
Dickeya dianthicola ME23 0.58 DZA65_RS21030 lysophospholipase L2 0.79 DZA65_RS19680 RNA chaperone Hfq low > 75
Dickeya dianthicola 67-19 0.57 HGI48_RS19985 lysophospholipase L2 0.79 HGI48_RS18545 RNA chaperone Hfq low > 71
Pectobacterium carotovorum WPP14 0.56 HER17_RS01410 lysophospholipase L2 0.82 HER17_RS02585 RNA chaperone Hfq low > 75
Shewanella loihica PV-4 0.32 Shew_3723 alpha/beta hydrolase fold (RefSeq) 0.69 Shew_0566 RNA chaperone Hfq (RefSeq) 0.33 27
Shewanella amazonensis SB2B 0.27 Sama_0083 alpha/beta hydrolase fold (RefSeq) 0.69 Sama_3025 host factor-I protein (RefSeq) — —

Not shown: 15 genomes with orthologs for BNILDI_05055 only; 7 genomes with orthologs for BNILDI_06970 only