Conservation of cofitness between BNILDI_15745 and BNILDI_06880 in Escherichia coli ECRC62

29 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli ECRC62 1.0 BNILDI_15745 rsmF 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF 1.0 BNILDI_06880 frdB fumarate reductase iron-sulfur protein 0.68 13
Escherichia coli ECOR27 1.00 NOLOHH_16950 rsmF 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF 1.00 NOLOHH_04610 frdB fumarate reductase iron-sulfur protein — —
Escherichia coli BL21 0.99 ECD_01806 16S rRNA m(5)C1407 methyltransferase, SAM-dependent 1.00 ECD_04025 fumarate reductase (anaerobic), Fe-S subunit — —
Escherichia coli ECOR38 0.99 HEPCGN_04840 rsmF 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF 1.00 HEPCGN_10575 frdB fumarate reductase iron-sulfur protein low > 87
Escherichia fergusonii Becca 0.98 EFB2_02166 Ribosomal RNA small subunit methyltransferase F 1.00 EFB2_04380 Fumarate reductase iron-sulfur subunit low > 86
Escherichia coli HS(pFamp)R (ATCC 700891) 0.98 OHPLBJKB_01896 Ribosomal RNA small subunit methyltransferase F 1.00 OHPLBJKB_03887 Fumarate reductase iron-sulfur subunit low > 73
Escherichia coli BW25113 0.98 b1835 yebU putative nucleolar proteins (VIMSS) 1.00 b4153 frdB fumarate reductase (anaerobic), Fe-S subunit (NCBI) low > 76
Escherichia coli Nissle 1917 0.98 ECOLIN_RS10215 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF 1.00 ECOLIN_RS26280 fumarate reductase iron-sulfur protein — —
Escherichia coli ECRC102 0.97 NIAGMN_01620 rsmF 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF 1.00 NIAGMN_10195 frdB fumarate reductase iron-sulfur protein — —
Escherichia coli ECRC98 0.97 JDDGAC_01015 rsmF 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF 1.00 JDDGAC_15985 frdB fumarate reductase iron-sulfur protein low > 86
Escherichia coli ECRC101 0.97 MCAODC_18965 rsmF 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF 1.00 MCAODC_02860 frdB fumarate reductase iron-sulfur protein low > 87
Escherichia coli ECRC100 0.97 OKFHMN_26440 rsmF 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF 1.00 OKFHMN_12350 frdB fumarate reductase iron-sulfur protein — —
Escherichia coli ECRC99 0.97 KEDOAH_01665 rsmF 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF 1.00 KEDOAH_15815 frdB fumarate reductase iron-sulfur protein — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.87 GFF2850 Ribosomal RNA small subunit methyltransferase F (EC 2.1.1.-) 0.97 GFF1997 Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1) low > 78
Enterobacter asburiae PDN3 0.80 EX28DRAFT_0721 NOL1/NOP2/sun family putative RNA methylase 0.94 EX28DRAFT_3354 succinate dehydrogenase and fumarate reductase iron-sulfur protein low > 76
Enterobacter sp. TBS_079 0.79 MPMX20_02742 Ribosomal RNA small subunit methyltransferase F 0.96 MPMX20_00436 Fumarate reductase iron-sulfur subunit low > 85
Klebsiella michiganensis M5al 0.76 BWI76_RS18000 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF 0.95 BWI76_RS02450 succinate dehydrogenase/fumarate reductase iron-sulfur subunit low > 92
Serratia liquefaciens MT49 0.68 IAI46_10775 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF 0.88 IAI46_01545 succinate dehydrogenase/fumarate reductase iron-sulfur subunit low > 86
Rahnella sp. WP5 0.67 EX31_RS24855 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF 0.87 EX31_RS08905 succinate dehydrogenase/fumarate reductase iron-sulfur subunit low > 89
Pectobacterium carotovorum WPP14 0.67 HER17_RS11715 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF 0.86 HER17_RS02385 succinate dehydrogenase/fumarate reductase iron-sulfur subunit low > 75
Dickeya dadantii 3937 0.66 DDA3937_RS11990 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF 0.89 DDA3937_RS18970 succinate dehydrogenase/fumarate reductase iron-sulfur subunit low > 74
Dickeya dianthicola ME23 0.65 DZA65_RS12530 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF 0.89 DZA65_RS20185 succinate dehydrogenase/fumarate reductase iron-sulfur subunit low > 75
Dickeya dianthicola 67-19 0.65 HGI48_RS12080 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF 0.89 HGI48_RS19065 succinate dehydrogenase/fumarate reductase iron-sulfur subunit low > 71
Vibrio cholerae E7946 ATCC 55056 0.57 CSW01_07545 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF 0.75 CSW01_13430 succinate dehydrogenase/fumarate reductase iron-sulfur subunit low > 62
Bacteroides thetaiotaomicron VPI-5482 0.19 BT2042 tRNA and rRNA cytosine-C5-methylase (NCBI ptt file) 0.12 BT3055 succinate dehydrogenase iron-sulfur protein (NCBI ptt file) — —
Echinicola vietnamensis KMM 6221, DSM 17526 0.18 Echvi_1153 tRNA and rRNA cytosine-C5-methylases 0.14 Echvi_2796 succinate dehydrogenase and fumarate reductase iron-sulfur protein — —
Bacteroides ovatus ATCC 8483 0.18 BACOVA_00671 NOL1/NOP2/sun family protein 0.12 BACOVA_02673 succinate dehydrogenase/fumarate reductase iron-sulfur subunit — —
Bacteroides stercoris CC31F 0.17 HMPREF1181_RS08100 rRNA cytosine-C5-methyltransferase 0.12 HMPREF1181_RS01485 succinate dehydrogenase/fumarate reductase iron-sulfur subunit — —
Mucilaginibacter yixingensis YX-36 DSM 26809 0.17 ABZR88_RS00225 RNA methyltransferase 0.12 ABZR88_RS19100 succinate dehydrogenase/fumarate reductase iron-sulfur subunit — —
Parabacteroides merdae CL09T00C40 0.16 HMPREF1078_RS16740 rRNA cytosine-C5-methyltransferase 0.11 HMPREF1078_RS05380 succinate dehydrogenase/fumarate reductase iron-sulfur subunit — —

Not shown: 7 genomes with orthologs for BNILDI_15745 only; 6 genomes with orthologs for BNILDI_06880 only