Conservation of cofitness between BNILDI_10045 and BNILDI_03985 in Escherichia coli ECRC62

27 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli ECRC62 1.0 BNILDI_10045 lysS lysine--tRNA ligase 1.0 BNILDI_03985 rfaQ lipopolysaccharide core heptosyltransferase RfaQ 0.88 11
Escherichia coli BW25113 1.00 b2890 lysS lysine tRNA synthetase, constitutive (NCBI) 0.71 b3632 rfaQ lipopolysaccharide core biosynthesis protein (NCBI) — —
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_00825 Lysine--tRNA ligase 1.00 OHPLBJKB_00070 Lipopolysaccharide core heptosyltransferase RfaQ — —
Escherichia coli BL21 1.00 ECD_02722 lysine tRNA synthetase, constitutive 1.00 ECD_03489 lipopolysaccharide core biosynthesis protein — —
Escherichia fergusonii Becca 1.00 EFB2_01011 Lysine--tRNA ligase 0.99 EFB2_00181 Lipopolysaccharide core heptosyltransferase RfaQ — —
Escherichia coli Nissle 1917 1.00 ECOLIN_RS16105 lysine--tRNA ligase 0.99 ECOLIN_RS20700 lipopolysaccharide core heptosyltransferase RfaQ low > 55
Escherichia coli ECOR38 1.00 HEPCGN_18880 lysS lysine--tRNA ligase 1.00 HEPCGN_14475 rfaQ lipopolysaccharide core heptosyltransferase RfaQ low > 87
Escherichia coli ECOR27 1.00 NOLOHH_11515 lysS lysine--tRNA ligase 1.00 NOLOHH_07530 rfaQ lipopolysaccharide core heptosyltransferase RfaQ low > 75
Escherichia coli ECRC102 1.00 NIAGMN_17355 lysS lysine--tRNA ligase 1.00 NIAGMN_13410 rfaQ lipopolysaccharide core heptosyltransferase RfaQ — —
Escherichia coli ECRC101 1.00 MCAODC_10110 lysS lysine--tRNA ligase 1.00 MCAODC_06160 rfaQ lipopolysaccharide core heptosyltransferase RfaQ — —
Escherichia coli ECRC99 1.00 KEDOAH_08550 lysS lysine--tRNA ligase 1.00 KEDOAH_12500 rfaQ lipopolysaccharide core heptosyltransferase RfaQ — —
Escherichia coli ECRC98 1.00 JDDGAC_23230 lysS lysine--tRNA ligase 1.00 JDDGAC_19275 rfaQ lipopolysaccharide core heptosyltransferase RfaQ — —
Escherichia coli ECRC100 1.00 OKFHMN_19590 lysS lysine--tRNA ligase 1.00 OKFHMN_15650 rfaQ lipopolysaccharide core heptosyltransferase RfaQ — —
Klebsiella michiganensis M5al 0.96 BWI76_RS23795 lysine--tRNA ligase 0.39 BWI76_RS27295 putative lipopolysaccharide heptosyltransferase III — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.95 GFF2987 Lysyl-tRNA synthetase (class II) (EC 6.1.1.6) 0.67 GFF379 Lipopolysaccharide heptosyltransferase III (EC 2.4.1.-) — —
Enterobacter sp. TBS_079 0.95 MPMX20_03749 Lysine--tRNA ligase 0.41 MPMX20_00107 Lipopolysaccharide core heptosyltransferase RfaQ — —
Enterobacter asburiae PDN3 0.95 EX28DRAFT_2941 Lysyl-tRNA synthetase (class II) 0.40 EX28DRAFT_3878 lipopolysaccharide heptosyltransferase III, putative — —
Dickeya dadantii 3937 0.91 DDA3937_RS03320 lysine--tRNA ligase 0.27 DDA3937_RS20455 putative lipopolysaccharide heptosyltransferase III — —
Dickeya dianthicola 67-19 0.91 HGI48_RS03460 lysine--tRNA ligase 0.27 HGI48_RS00755 putative lipopolysaccharide heptosyltransferase III — —
Dickeya dianthicola ME23 0.91 DZA65_RS03505 lysine--tRNA ligase 0.26 DZA65_RS00810 putative lipopolysaccharide heptosyltransferase III — —
Serratia liquefaciens MT49 0.89 IAI46_20710 lysine--tRNA ligase 0.43 IAI46_24775 putative lipopolysaccharide heptosyltransferase III — —
Pectobacterium carotovorum WPP14 0.88 HER17_RS17870 lysine--tRNA ligase 0.31 HER17_RS20785 putative lipopolysaccharide heptosyltransferase III — —
Pantoea sp. MT58 0.88 IAI47_03840 lysine--tRNA ligase 0.40 IAI47_00660 putative lipopolysaccharide heptosyltransferase III — —
Rahnella sp. WP5 0.88 EX31_RS13460 lysine--tRNA ligase 0.42 EX31_RS14430 putative lipopolysaccharide heptosyltransferase III — —
Erwinia tracheiphila SCR3 0.86 LU632_RS05995 lysS lysine--tRNA ligase 0.39 LU632_RS21950 rfaQ putative lipopolysaccharide heptosyltransferase III — —
Rhodanobacter sp. FW510-T8 0.58 OKGIIK_07025 lysS lysine--tRNA ligase 0.11 OKGIIK_05620 rfaF ADP-heptose--LPS heptosyltransferase — —
Desulfovibrio vulgaris Miyazaki F 0.50 DvMF_2993 lysyl-tRNA synthetase (RefSeq) 0.15 DvMF_3035 glycosyl transferase family 9 (RefSeq) — —
Synechococcus elongatus PCC 7942 0.46 Synpcc7942_2415 lysS lysyl-tRNA synthetase 0.08 Synpcc7942_0682 hypothetical protein — —

Not shown: 16 genomes with orthologs for BNILDI_10045 only; 20 genomes with orthologs for BNILDI_03985 only