Conservation of cofitness between BNILDI_11870 and BNILDI_00790 in Escherichia coli ECRC62

25 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli ECRC62 1.0 BNILDI_11870 rseC SoxR-reducing system protein RseC 1.0 BNILDI_00790 yqhC DNA-binding transcriptional regulator YqhC 0.83 11
Escherichia coli BL21 1.00 ECD_02464 SoxR iron-sulfur cluster reduction factor component 1.00 ECD_02883 transcriptional activator of yqhD low > 61
Escherichia coli ECRC100 1.00 OKFHMN_21395 rseC SoxR-reducing system protein RseC 0.99 OKFHMN_18950 yqhC DNA-binding transcriptional regulator YqhC low > 80
Escherichia coli ECRC101 1.00 MCAODC_11925 rseC SoxR-reducing system protein RseC 0.99 MCAODC_09465 yqhC DNA-binding transcriptional regulator YqhC low > 87
Escherichia coli ECRC98 1.00 JDDGAC_25060 rseC SoxR-reducing system protein RseC 0.99 JDDGAC_22585 yqhC DNA-binding transcriptional regulator YqhC low > 86
Escherichia coli ECRC99 1.00 KEDOAH_06830 rseC SoxR-reducing system protein RseC 0.99 KEDOAH_09195 yqhC DNA-binding transcriptional regulator YqhC — —
Escherichia coli ECRC102 1.00 NIAGMN_19165 rseC SoxR-reducing system protein RseC 0.99 NIAGMN_16715 yqhC DNA-binding transcriptional regulator YqhC — —
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_01137 Protein RseC 1.00 OHPLBJKB_00691 HTH-type transcriptional activator RhaS low > 73
Escherichia coli BW25113 1.00 b2570 rseC RseC protein involved in reduction of the SoxR iron-sulfur cluster (NCBI) 0.99 b3010 yqhC putative ARAC-type regulatory protein (VIMSS) low > 76
Escherichia coli ECOR27 1.00 NOLOHH_13070 rseC SoxR-reducing system protein RseC 0.99 NOLOHH_10725 yqhC DNA-binding transcriptional regulator YqhC low > 75
Escherichia fergusonii Becca 0.99 EFB2_01326 Protein RseC 0.99 EFB2_00800 HTH-type transcriptional activator RhaS low > 86
Escherichia coli Nissle 1917 0.99 ECOLIN_RS14545 SoxR-reducing system protein RseC 0.93 ECOLIN_RS17325 DNA-binding transcriptional regulator YqhC low > 55
Escherichia coli ECOR38 0.99 HEPCGN_20540 rseC SoxR-reducing system protein RseC 1.00 HEPCGN_17815 yqhC DNA-binding transcriptional regulator YqhC low > 87
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.84 GFF2110 Sigma factor RpoE regulatory protein RseC 0.79 GFF3122 Transcriptional regulator, AraC family low > 78
Klebsiella michiganensis M5al 0.77 BWI76_RS21340 SoxR reducing system protein RseC 0.83 BWI76_RS24295 AraC family transcriptional regulator low > 92
Enterobacter sp. TBS_079 0.76 MPMX20_03441 Protein RseC 0.75 MPMX20_03854 HTH-type transcriptional activator RhaS low > 85
Enterobacter asburiae PDN3 0.76 EX28DRAFT_0075 positive regulator of sigma(E), RseC/MucC 0.77 EX28DRAFT_3048 AraC-type DNA-binding domain-containing proteins low > 76
Pantoea sp. MT58 0.63 IAI47_04865 SoxR-reducing system protein RseC 0.61 IAI47_03205 AraC family transcriptional regulator low > 76
Rahnella sp. WP5 0.57 EX31_RS21815 SoxR-reducing system protein RseC 0.56 EX31_RS08035 AraC family transcriptional regulator low > 89
Serratia liquefaciens MT49 0.53 IAI46_19570 SoxR-reducing system protein RseC 0.55 IAI46_21745 AraC family transcriptional regulator low > 86
Pectobacterium carotovorum WPP14 0.46 HER17_RS05795 SoxR-reducing system protein RseC 0.51 HER17_RS19700 AraC family transcriptional regulator low > 75
Dickeya dadantii 3937 0.40 DDA3937_RS15750 SoxR-reducing system protein RseC 0.53 DDA3937_RS01805 AraC family transcriptional regulator low > 74
Dickeya dianthicola 67-19 0.39 HGI48_RS15835 SoxR-reducing system protein RseC 0.53 HGI48_RS01700 AraC family transcriptional regulator — —
Dickeya dianthicola ME23 0.38 DZA65_RS16915 SoxR-reducing system protein RseC 0.54 DZA65_RS01775 AraC family transcriptional regulator — —
Shewanella loihica PV-4 0.20 Shew_1051 positive regulator of sigma E, RseC/MucC (RefSeq) 0.31 Shew_0071 AraC family transcriptional regulator (RefSeq) — —
Pseudomonas stutzeri RCH2 0.20 Psest_3097 Positive regulator of sigma E activity 0.23 Psest_1393 AraC-type DNA-binding domain-containing proteins — —

Not shown: 6 genomes with orthologs for BNILDI_11870 only; 30 genomes with orthologs for BNILDI_00790 only